Éditeur(s) : Actes de colloques. Ifremer Brest [ACTES COLLOQ. IFREMER.]. 1986
Résumé : Bacterial density of the coelenteric fluid (CF) of some anthozoan species was determined in situ and under laboratory conditions. In all species examined bacterial density of the CF was higher in the gastral cavity than in ambient ranging from 10 super(5) up to 5 x 10 super(6) cells. ml super(-1). Incubation experiments with the CF indicate that a bacterial population within the coelenteron is efficiently controlled by the CF, favoring bacterial growth if bacterial densities are low in the CF and showing clearance activity at high bacterial densities. Feeding of pre-starved anthozoans caused a rapid response of coelenteric rod-shaped bacteria. Evidence is presented that coelenteric bacteria are digested periodically although they contribute 1% to the respiratory carbon losses of the antozoans tested. Therefore, it is more likely that the coelenteric bacterial population provide other substances which cannot be synthesized by the host.
La densité des bactéries du fluide gastrique de différents anthozoaires a été déterminée in situ et au laboratoire. Pour toutes les espèces étudiées, la densité des bactéries dans le fluide gastrique était plus élevée que dans l'eau ambiante et comprise entre 105et 106 cellules m"1. Des expériences d'incubation du fluide gastrique montrent que la population bactérienne est contrôlée efficacement par ce fluide gastrique, favorisant la croissance de bactéries lorsque la densité est faible mais révélant des activités de digestion lorsque la densité est élevée. En nourrissant des anthozoaires mis àjeun plusieurs jours, on provoque une réaction rapide des bactéries déforme bacillaire. Certaines observations montrent que les bactéries gastriques se développent et sont digérées par cycle dans le coelenteron. Néanmoins, la contribution en carbone de ces dernières, comparée aux pertes d'énergie par Sa respiration, représenterait moins de i ','-£. li est probable que cette population bactérienne fournisse des substances qui ne peuvent être synthétisées par i'hôte.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1984/acte-989.pdf
http://archimer.ifremer.fr/doc/00000/989/

Résumé : All the biological elements obtained in the two first phases of the study and the basical economical data are synthetized in a bio-economical model. From a typology of French fleets fishing in Celtic Sea, the carried out "métiers" (target-species + areas) are pointed out, which allows to define spatio-temporal "boxes". In each compartment, at a given time, the interactive components between fleets and stocks are known. The principle of the model consists to distribute, for each time interval, the fleets in each box. The allocation of fishing effort is assigned by two coefficients : "adherence" and "preference", expressing the abilities of fleets to seize the opportunities. Thus, it is possible to assess the consequences of usual management measures : quotas, mesh size, limitation of fishing effort, etc ...
Une synthèse de tous les éléments biologiques acquis précédemment et des données économiques de base est effectuée dans un modèle bio-économique. A partir d'une typologie des flottilles françaises péchant en Mer Celtique, on met en évidence les métiers (espèces + secteurs) pratiqués, ce qui permet de définir des compartiments spatio-temporels dans lesquels on connaît à un moment donné les éléments interactifs entre flottilles et stocks. Le principe du modèle consiste à distribuer, à chaque intervalle de temps les flottilles dans ces compartiments. L'allocation de l'effort est gérée par deux coefficients, adhérence et préférence, qui traduisent les capacités des flottilles à saisir les opportunités. Ainsi, il est possible d'évaluer les conséquences des mesures habituelles de gestion : quotas, maillages, limitation de l'effort, etc...

Droits : 1989 Ifremer
http://archimer.ifremer.fr/doc/1989/rapport-1564.pdf
http://archimer.ifremer.fr/doc/00000/1564/

Éditeur(s) : HAL CCSD Wiley
Résumé : The allocation and cycling of carbon (C) within forests is an important component of the biospheric C cycle, but is particularly understudied within tropical forests. We synthesise reported and unpublished results from three lowland rainforest sites in Amazonia (in the regions of Manaus, Tapajos and Caxiuana), all major sites of the Large-Scale Biosphere-Atmosphere Programme (LBA). We attempt a comprehensive synthesis of the C stocks, nutrient status and, particularly, the allocation and internal C dynamics of all three sites. The calculated net primary productivities (NPP) are 10.1 +/- 1.4 Mg C ha(-1) yr(-1) (Manaus), 14.4 +/- 1.3 Mg C ha(-1) yr(-1) (Tapajos) and 10.0 +/- 1.2 Mg C ha(-1) yr(-1) (Caxiuana). All errors bars report standard errors. Soil and leaf nutrient analyses indicate that Tapajos has significantly more plant-available phosphorus and calcium. Autotrophic respiration at all three sites (14.9-21.4 Mg C ha yr(-1)) is more challenging to measure, with the largest component and greatest source of uncertainty being leaf dark respiration. Comparison of measured soil respiration with that predicted from C cycling measurements provides an independent constraint. It shows general good agreement at all three sites, with perhaps some evidence for measured soil respiration being less than expected. Twenty to thirty percent of fixed C is allocated belowground. Comparison of gross primary productivity (GPP), derived from ecosystem flux measurements with that derived from component studies (NPP plus autotrophic respiration) provides an additional crosscheck. The two approaches are in good agreement, giving increased confidence in both approaches to estimating GPP. The ecosystem carbon-use efficiency (CUEs), the ratio of NPP to GPP, is similar at Manaus (0.34 +/- 0.10) and Caxiuana (0.32 +/- 0.07), but may be higher at Tapajos (0.49 +/- 0.16), although the difference is not significant. Old growth or infertile tropical forests may have low CUE compared with recently disturbed and/or fertile forests.
ISSN: 1354-1013

hal-01032150
https://hal.archives-ouvertes.fr/hal-01032150
DOI : 10.1111/j.1365-2486.2008.01780.x

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
We performed forward modelling of seismic anisotropy beneath a migrating strike-slip plate boundary to: (1) test if such a geodynamic context might explain teleseismic shear wave splitting data in the vicinity of the central part of the San Andreas Fault and (2) constrain the power of such data to unravel vertical and lateral variations in deformation patterns in the upper mantle. The modelling involves five steps: (1) thermomechanical modelling, using a finite-element code, of the deformation field, (2) viscoplastic self-consistent modelling of the resulting olivine and pyroxene crystal preferred orientations, (3) calculation of the elasticity tensors for different domains of the finite elements (FEs) model, (4) forward modelling of seismic wave propagation through the model using ray theory, finite-frequency theory and a full-wave approach and (5) performing splitting measurements on the synthetic seismograms. SKS splitting data in central California are best fitted by a model with a hotter geotherm within 60 km of the plate boundary accounting for the opening of an asthenospheric window due to the northward migration of the Mendocino Triple Junction. The westward motion of the plate boundary cannot however explain the rotation of fast polarization directions east of the San Andreas Fault in central California. Comparison between modelled and measured individual shear wave splitting also implies that the homogeneity of the two-layer models accounting for the observations in the vicinity of the San Andreas Fault indicates a sharp transition between lithospheric and asthenospheric deformations beneath this plate boundary. The ability of different synthetic approaches to localize horizontally and vertically the plate boundary-related deformation differs significantly. Splitting in ray theory synthetics closely follow variations in olivine crystallographic preferred orientations in the model. In contrast, splitting analysis on full-wave synthetics, which should be more representative of actual long-period SKS waves, results in smooth apparent lateral variations of anisotropy; the exact location and width of the plate boundary may only be retrieved by comparing fast-polarization profiles obtained using a multichannel analysis on waves with different periods.
ISSN: 0956-540X

hal-01236150
http://hal.univ-reunion.fr/hal-01236150
http://hal.univ-reunion.fr/hal-01236150/document
http://hal.univ-reunion.fr/hal-01236150/file/Bonnin_San_Andreas_modelling_GJI2012.pdf
DOI : 10.1111/j.1365-246X.2012.05650.x

Éditeur(s) : Université Montpellier 2 - Sciences et Techniques du Languedoc
Résumé : The work reported here was motivated by the economical importance of the pacific blue shrimp Litopenaeus stylirostris farming where high mortality rates are due to bacterial and viral diseases. It consists in the characterisation of two original peptides, the first members of a new multifunctional family of peptides from peneide shrimps, the stylicines. Those two peptides, named stylicines 1 and 2, are negatively charged (pI < 6.0), and characterised by a proline-rich N-terminal region and a C-terminal region containing 13 cysteine residues. Stylicines are synthesized by heamocytes where they are stored within small cytoplasmic granules. To understand the role of these peptides in the immune response of shrimps to a vibrio infection, their recombinant forms were produced in E. coli BL21 (DE3) plysS, purified and characterised. The two rstylicines display biological anti-proliferative and blood clotting activities. Only rstylicine 1 displays antimicrobial activities: antifungal against Fusarium oxysporum (MIC<2.5μM) and bacteriostatic against Gram (−) bacteria, Vibrio sp. (MIC<80μM). Moreover this peptide displays an LPS-binding activity (dissociation constant (Kd) of 9.6×10−8 M) and agglutinate Vibrio. penaeicida "in vitro". Finally, the presence of sequences coding for modified forms of stylicine 1 in some shrimp’s genome may be in relation with their lower ability to survive infections.
Les travaux présentés dans ce mémoire ont été motivés par l’importance économique de l’élevage de la crevette bleue du pacifique Litopenaeus stylirostris dont les fortes mortalités sont principalement dues au développement de maladies bactériennes et virales. Ils ont consisté en la caractérisation des deux premiers membres d’une famille originale de peptides multifonctionnels présents chez les crevettes pénéides, les stylicines. Ces peptides, nommés stylicines 1 et 2, sont des peptides anioniques (pI < 6.0), formés d’une région amino-terminale riche en résidus de type proline et d’une région carboxyterminale riche de treize résidus cystéines. Ces molécules sont synthétisées et stockées dans de petits granules présents dans le cytoplasme des hémocytes. Pour mieux appréhender leurs rôles dans la réponse immunitaire des crevettes à une infection par des Vibrio, leurs formes recombinantes ont été produites dans E. coli BL21 (DE3) plysS, purifiées et caractérisées. Les deux rstylicines présentent des activités antiproliférative et anticoagulante. Seule la rstylicine1 présente des activités antimicrobiennes : antifongique sur Fusarium oxysporum (CMI<2.5 μM), et antibactérienne (bactériostatique) sur Vibrio sp (CMI<80 μM). Ce peptide est également capable de se lier aux LPS des bactéries à Gram (-) (Kd= 9.6x10-8 M) et d’agglutiner V. penaeicida "in vitro". Enfin, l’existence de gènes codant des formes modifiées de la stylicine1, chez certaines crevettes, pourrait être en relation avec une diminution de la résistante des individus aux infections.

Droits : 2010 The Author, Univ Montpellier 2
http://archimer.ifremer.fr/doc/00024/13558/10612.pdf
http://archimer.ifremer.fr/doc/00024/13558/

Éditeur(s) : HAL CCSD
Résumé : Co-encadrement assuré par le Groupement pour le Développement de la Télédétection Aérospatiale (GDTA) Diplôme : DESS
il s'agit d'un type de produit dont les métadonnées ne correspondent pas aux métadonnées attendues dans les autres types de produit : DISSERTATION
This document proposes a new map of the Eastern Guyana Shield, with the SPOT4-VEGETATION remotesensed datas of the year 2000. A new synthesis method, with the mean value, was applied and compared with the Maximum Value Method (WVC). To prepare this datas for the synthesis, a cloud filter was defined :BSC (BEST Sky Clear). With this results, an ISODATA classification was proceeded, and, produces 25 classes to detail the tropical maist forest with the 1 km low resolution. To valid this result, this document propose a method with the higthresolution datas Landsat 7 ETM+. This method aims to guide the ground truth and goes thoroughly into the description of the moist tropical forest classes. The sample, used to try this method, shows the boundaries and the constraints of this method. This points are debating in the discussion. Finally, the perspectives to develop the method are presented in the conclusion.
Ce document propose une nouvelle cartographie du Bouclier Oriental Guyanais à l'aide d'images satellites SPOT4-VEGETATION de l'année 2000. Une nouvelle méthode de synthèse annuelle, utilisant la valeur moyenne de la radiométrie, a été appliquée et comparée à la méthode du Maximum Value Composite (MVC). A cette occasion, un filtre de nuage a été défini pour préparer les données à cette synthèse : le filtre BSC (Best Sky Clear). Sur la base de ce résultat, une classification ISODATA a été réalisée, produisant 25 classes, et mettant en évidence les différents milieux forestiers des tropiques humides à une résolution spatiale de 1 km. Pour valider la classification, une méthode est proposée utilisant des images hautes résolutions Landsat 7 ETM+. Cette méthode permet de cadrer les vérifications sur le terrain et d'approfondir la définition des classes de forêt tropicale humide. L'échantillon utilisé pour tester la méthode met en évidence les limites et contraintes de la démarche proposée. Ces points sont exprimés dans la discussion. Enfin les perspectives de développements sont abordées dans la conclusion.
https://hal.archives-ouvertes.fr/hal-01189195

hal-01189195
https://hal.archives-ouvertes.fr/hal-01189195
PRODINRA : 13538

Éditeur(s) : HAL CCSD Ocean Drilling Programm
Résumé : This paper provides a summary of postcruise scientific results from Ocean Drilling Program (ODP) Leg 209 available to date, building upon shipboard observations and syntheses summarized in the Leg 209 Initial Results volume. During Leg 209, 19 holes were drilled at 8 sites along the Mid-Atlantic Ridge from 14°43´ to 15°44´N, mainly in residual mantle peridotite intruded by gabbroic rocks, in order to understand the tectonic and structural processes responsible for formation of oceanic lithosphere with abundant residual peridotite exposed on the seafloor coupled with a relatively low proportion of volcanic rocks. Based on proportions of recovered lithologies, the entire area may be underlain by mantle peridotite with ~20%–40% gabbroic intrusions and impregnations. Impregnated peridotites with olivine + two pyroxenes + plagioclase + spinel that apparently formed in equilibrium probably record crystallization from primitive mid-ocean-ridge basalt at pressures of 0.5–0.6 GPa. Metamorphic equilibria record isobaric cooling to ~1100°C at this pressure. Thus, the conductively cooled thermal boundary layer beneath the Mid-Atlantic Ridge in this region is >15 km thick. Combined crystallization and reaction with residual peridotite formed a series of impregnated peridotites recording increasing Na content at nearly constant Mg#; this process could explain some of the variation in fractionation-corrected Na (e.g., Na = 8.0) observed in mid-ocean-ridge basalts. Clinopyroxene textures and compositions record such impregnation processes, and they are particularly well documented for Site 1274. Other Leg 209 gabbroic rocks formed from extensive crystallization of highly evolved melts, indicating that a substantial proportion of melt entering the thermal boundary layer crystallizes entirely beneath the seafloor, with no volcanic equivalent. Alteration of peridotites occurred over a range of temperatures and is the result of three distinct processes: rock-dominated serpentinization with formation of brucite in olivine-rich lithologies, fluid-dominated serpentinization with formation of magnetite and no brucite, and fluid-dominated talc alteration with addition of SiO2 as well as H2O and oxygen. The latter two processes also exhibit detectable trace element metasomatism that is distinct in its character from the igneous impregnation described in the previous paragraph. Microstructures show that most residual peridotites were not ductilely deformed at temperatures less than ~1200°C. Structural and paleomagnetic data require tectonic rotations of relatively undeformed blocks; some rotations probably exceeded 60° around nearly horizontal axes parallel to the rift axis. Rotations occurred along several generations of high-temperature mylonitic shear zones extending deeper than 15 km depth and numerous faults at lower temperature. Early formed shear zones and faults were passively rotated around later features; such a process could have produced low-angle fault surfaces without slip on low-angle faults. This region provides end-member examples of processes that are common at many or most slow-spreading ridges. Osmium isotope ratios indicate an ancient history of depletion for residual peridotites from the 14°–16°N region along the Mid-Atlantic Ridge. Though depleted Os isotope ratios in peridotite have been reported elsewhere along the global ridge system, the values from this region are among the most depleted. In general, Os isotope ratios from mid-ocean-ridge basalts are systematically more radiogenic than Os isotope ratios from ridge peridotite samples, suggesting a polygenetic heterogeneous source for mid-ocean-ridge basalts. Geochemical studies of zircons from Leg 209 gabbroic rocks and impregnated peridotites, together with other ridge and arc-related zircons, indicate that ridge zircons have systematically lower fractionation-corrected U and Th concentrations compared to arc zircons. This observation provides a tool for interpreting the tectonic provenance of ancient detrital zircons and indicates an arclike provenance for Hadean detrital zircons. Geobiological studies and aerobiological studies were also undertaken during Leg 209. The geobiological work found no measurable microbial enhancement of olivine dissolution rate, possibly because the samples from Leg 209 were sterile. The aerobiological study determined that dust from North Africa, collected from the derrick of the JOIDES Resolution during Leg 209, contains a variety of abundant microorganisms.
Proceedings ODP, scientific results, 209

hal-00407966
https://hal.archives-ouvertes.fr/hal-00407966
DOI : 10.2973/odp.proc.sr.209.001.2007

Éditeur(s) : Actes de colloque Ifremer n°28, 2000. ISBN-13 978-2-84433-047-5 ISBN-10 978-2-84433-047-5
Résumé : The international symposium "Tuna Fishing and Fish Aggregating Devices " , October 1999, in Martinique, takes stock of the exploitation of large pelagic fish around FADs, based on regional synthesis for the three oceans and the Mediterranean Sea. Main themes include technology, fishing methods, impact on resources, biology of fish aggregation, anthropology and economic aspects of FAD exploitation. The meeting will gather and disseminate results from recent and ongoing studies on FADs in the different oceans of the world, enhance collaboration between scientists and managers involved in the development of FADs, promote the emergence of scientific and technical research, form a network for cooperation and enhance communications between researchers in the different locations concerned.
Le colloque international « Pêche thonière et dispositifs de concentration de poissons» organisé en octobre 1999, en Martinique, permet de dresser un bilan, sous forme de synthèses régionales, de l'exploitation des grands poissons pélagiques à l'aide de DCP dans les trois océans et en Méditerranée. La technologie, les méthodes de pêche, l'impact sur les ressources, le comportement agrégatif des poissons et les aspects socio-économiques de l'utilisation des DCP sont les principaux thèmes développés. Ces travaux permettront d'assurer une diffusion large des résultats à l'échelle de l'océan mondial, de favoriser les échanges entre les scientifiques et les gestionnaires impliqués dans le développement des systèmes DCP, de promouvoir l'émergence de thèmes et projets de recherche scientifique et technologique, de mettre en oeuvre un réseau de communication et d'échanges entre les sites et les régions concernées.

Droits : 2000 Ifremer
http://archimer.ifremer.fr/doc/00042/15326/12646.pdf
http://archimer.ifremer.fr/doc/00042/15326/

Éditeur(s) : HAL CCSD Springer
Résumé : International audience
We present here a synthesis of the evolution of rifted continental margin systems in the Gulf of Aden. These margins are volcanic to the west of the Gulf of Aden, where they are influenced by the Afar hotspot, and non-volcanic east of longitude 46° E. The combined use of magnetics, gravity, seismic reflection, field observations (tectonic, stratigraphic and sedimentological) and oil well data allowed us to obtain better constraints on the timing of continental rifting and seafloor spreading. From the Permo-Triassic to the Oligocene, the Arabian-African plate was subject to distributed extension, probably due, at least from the Cretaceous, to tensile stresses related to the subduction of the Tethysian slab in the north. In Late Eocene-Early Oligocene, 34-33 Ma ago, rifting started to localise along the future area of continental breakup. Initially guided by the inherited basins, continental rifting then occurred synchronously over the entire gulf before becoming localised on the northern and southern borders of the inherited grabens, in the direction of the Afar hotspot. In the areas with non-volcanic margins (in the east), the faults marking the end of rifting trend parallel to the inherited grabens. Only the transfer faults cross-cut the inherited grabens, and some of these faults later developed into transform faults. The most important of these transform faults follow a Precambrian trend. Volcanic margins were formed in the west of the Gulf, up to the Guban graben in the southeast and as far as the southern boundary of the Bahlaf graben in the northeast. Seaward dipping reflectors can be observed on many oil industry seismic profiles. The influence of the hotspot during rifting was concentrated on the western part of the gulf. Therefore, it seems that the western domain was uplifted and eroded at the onset of rifting, while the eastern domain was characterised by more continuous sedimentation. The phase of distributed deformation was followed by a phase of strain localisation during the final rifting stage, just before formation of the Ocean-Continent Transition (OCT), in the most distal graben (DIM graben). About 20 Ma ago, at the time of the continental break-up, the emplacement of the OCT started in the east with exhumation of the subcontinental mantle. Farther west, the system was heated up by the strong influence of the Afar hotspot, which led to breakup with much less extension. In the Gulf of Aden (s.str), up to the Shukra El Sheik fracture zone, oceanic spreading started 17.6 Ma ago. West of this fracture zone, oceanic accretion started 10 Ma ago, and 2 Ma ago in the Gulf of Tadjoura. Post-rift deformation of the eastern margins of the Gulf of Aden can be seen in the distal and proximal domains. Indeed, the substantial post-rift uplift of these margins could be associated with either the continental break-up, or activity of the Afar hotspot and related volcanic/magmatic activity. Uplift of the northern proximal margin was still active (e.g. stepped beach rocks exposed at 60 m of 2 Ma; 30 m of 35,200 years; 10 and 2 m) and active volcanoes can be inferred at depths of between 70 and 200 km beneath the margin (at 5-10 km distance from the coast). On the distal margin, heat flow measurements show a high value that is associated with post-rift volcanic activity and the development of a volcano (with flows and sills) shortly after the formation of the OCT. The Afar hotspot is therefore important for several reasons. It allows the localisation of deformation along the Red Sea/Aden system and the rapid opening of the Gulf after the continental break-up; its influence also seems to persist during the post-rift period.
ISSN: 1866-7411

hal-01053089
https://hal.archives-ouvertes.fr/hal-01053089
DOI : 10.1007/s12517-011-0475-4

Éditeur(s) : HAL CCSD
Résumé : International audience
In all vertebrate species, estrogens play a crucial role in the development, growth, and function of reproductive and nonreproductive tissues. A large number of natural or synthetic chemicals present in the environment and diet can interfere with estrogen signaling; these chemicals are called endocrine disrupting chemicals (EDCs) or xenoestrogens. Some of these compounds have been shown to induce adverse effects on human and animal health, and some compounds are suspected to contribute to diverse disease development. Because xenoestrogens have varying sources and structures and could act in additive or synergistic effects when combined, they have multiple mechanisms of action. Consequently, an important panel of in vivo and in vitro bioassays and chemical analytical tools was used to screen, evaluate, and characterize the potential impacts of these compounds on humans and animals. In this paper, we discuss different molecular actions of some of the major xenoestrogens found in food or the environment, and we summarize the current models used to evaluate environmental estrogens.
Int J Endocrinol

Droits : info:eu-repo/semantics/OpenAccess
inserm-00863365
http://www.hal.inserm.fr/inserm-00863365
http://www.hal.inserm.fr/inserm-00863365/document
http://www.hal.inserm.fr/inserm-00863365/file/501851.pdf
PUBMED : 23737774

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Thermal diffusivity of synthetic quartz single-crystals and natural polycrystalline aggregates were measured using a modified Angstrom method at ambient pressure and up to 800 degrees C in order to investigate the effect of crystal preferred orientation on thermal diffusivity of quartz rich rocks. The thermal diffusivity tensor of quartz was determined by measuring the thermal diffusivity of an oriented synthetic quartz single-crystal along the [100] and [001] directions. A naturally deformed, fine-grained quartzite mylonite, was used to compare the single crystal properties with aggregate properties. Using the crystal preferred orientations (CPO) measured by the Electron Back Scattered Diffraction (EBSD) method and the measured thermal diffusivity tensor of quartz, the three-dimensional aggregate thermal diffusivity was modelled using volume averaging models. In order to test the validity of these models that are only based on the properties of the constituent minerals, the thermal diffusivity was then measured on oriented cores as a function of temperature, along three orthogonal directions, parallel to the (X-lineation, Y, Z-pole to foliation) structural frame. Both modelled and direct measurement of thermal diffusivity show an anisotropy of thermal diffusivity, heat transport being more effective parallel to Y-direction and less effective parallel to the lineation X-direction. Thermal diffusivities measured in a given direction on the natural rock are lower by less than 10% than the modelled thermal diffusivity in the same direction, showing that rock imperfections have a weak effect on heat transport. In addition, the modelled thermal diffusivity anisotropy based on the characterization of crystal orientations and thermal diffusivity tensor shows a good agreement with measurements in both alpha and beta stability field. This validation of the petrophysical simulation allows for evaluating the 3D thermal diffusivity of quartz rich rocks in different crustal conditions. The 3D thermal diffusivity of five naturally deformed quartzites displaying quartz fabrics expected in different crustal pressure and temperature ranges were simulated. The resulting thermal diffusivity anisotropies of quartzites range between 40% and 10%, depending on temperature, crystallographic fabric patterns and fabric strength. Under crustal conditions, quartzites deformed in the granulite facies display a high thermal diffusivity in the (XZ) foliation plane, whereas quartzites deformed in greenschist facies have highest thermal diffusivity in the (Z) direction normal to the foliation plane.
ISSN: 0040-1951

hal-00413568
https://hal.archives-ouvertes.fr/hal-00413568
DOI : 10.1016/j.tecto.2008.11.006

Éditeur(s) : HAL CCSD
Résumé : National audience
Objectives To define the different stages of spontaneous labour. To determine the indications, modalities of use and the effects of administering synthetic oxytocin. And to describe undesirable maternal and perinatal outcomes associated with the use of synthetic oxytocin. Method A systematic review was carried out by searching Medline database and websites of obstetrics learned societies until March 2016. Results The 1st stage of labor is divided in a latence phase and an active phase, which switch at 5 cm of cervical dilatation. Rate of cervical dilatation is considered as abnormal below 1 cm per 4 hour during the first part of the active phase, and blow 1 cm per 2 hours above 7 cm of dilatation. During the latent phase of the first stage of labor, i.e. before 5 cm of cervical dilatation, it is recommended that an amniotomy not be performed routinely and not to use oxytocin systematically. It is not recommended to expect the active phase of labor to start the epidural analgesia if patient requires it. If early epidural analgesia was performed, the administration of oxytocin must not be systematic. If dystocia during the active phase, an amniotomy is recommended in first-line treatment. In the absence of an improvement within an hour, oxytocin should be administrating. However, in the case of an extension of the second stage beyond 2 hours, it is recommended to administer oxytocin to correct a lack of progress of the presentation. If dynamic dystocia, it is recommended to start initial doses of oxytocin at 2 mUI/min, to respect at least 30 min intervals between increases in oxytocin doses delivered, and to increase oxytocin doses by 2 mUI/min intervals without surpassing a maximum IV flow rate of 20 mUI/min. The reported maternal adverse effects concern uterine hyper-stimulation, uterine rupture and postpartum haemorrhage, and those of neonatal adverse effects concern foetal heart rate anomalies associated with uterine hyper-stimulation, neonatal morbidity and mortality, neonatal jaundice, weak suck/poor breastfeeding latch and autism. Conclusion The widespread use of oxytocin during spontaneous labour must not be considered as simply another inoffensive prescription without any possible deleterious consequences for mother or foetus. Conditions for administering the oxytocin must therefore respect medical protocols. Indications and patient consent have to be report in the medical file. © 2016 Elsevier Masson SAS
Revue Sage - Femme

hal-01467543
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01467543
DOI : 10.1016/j.sagf.2016.11.006

Éditeur(s) : HAL CCSD MDPI AG, Basel, Switzerland
Résumé : International audience
Abstract View references (46)This work shows the preparation of silica membranes by a two-step sol-gel method using tetraethyl orthosilicate in ethanolic solution by employing nitric acid and ammonia as co-catalysts. The sols prepared in pH 6 resulted in the lowest concentration of silanol (Si-OH) species to improve hydrostability and the optimized conditions for film coating. The membrane was tested to desalinate 0.3-15 wt % synthetic sodium chloride (NaCl) solutions at a feed temperature of 22 °C followed by long term membrane performance of up to 250 h in 3.5 wt % NaCl solution. Results show that the water flux (and salt rejection) decrease with increasing salt concentration delivering an average value of 9.5 kg m-2 h-1 (99.6%) and 1.55 kg m-2 h-1 (89.2%) from the 0.3 and 15 wt % saline feed solutions, respectively. Furthermore, the permeate salt concentration was measured to be less than 600 ppm for testing conditions up to 5 wt % saline feed solutions, achieving below the recommended standard for potable water. Long term stability shows that the membrane performance in water flux was stable for up to 150 h, and slightly reduced from thereon, possibly due to the blockage of large hydrated ions in the micropore constrictions of the silica matrix. However, the integrity of the silica matrix was not affected by the long term testing as excellent salt rejection of >99% was maintained for over 250 h. © 2013 by the authors; licensee MDPI, Basel, Switzerland.
ISSN: 2077-0375

hal-01683203
https://hal.univ-antilles.fr/hal-01683203
DOI : 10.3390/membranes3030136

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
The tg(cyp19a1b-GFP) transgenic zebrafish expresses GFP (green fluorescent protein) under the control of the cyp19a1b gene, encoding brain aromatase. This gene has two major characteristics: (i) it is only expressed in radial glial progenitors in the brain of fish and (ii) it is exquisitely sensitive to estrogens. Based on these properties, we demonstrate that natural or synthetic hormones (alone or in binary mixture), including androgens or progestagens, and industrial chemicals induce a concentration-dependent GFP expression in radial glial progenitors. As GFP expression can be quantified by in vivo imaging, this model presents a very powerful tool to screen and characterize compounds potentially acting as estrogen mimics either directly or after metabolization by the zebrafish embryo. This study also shows that radial glial cells that act as stem cells are direct targets for a large panel of endocrine disruptors, calling for more attention regarding the impact of environmental estrogens and/or certain pharmaceuticals on brain development. Altogether these data identify this in vivo bioassay as an interesting alternative to detect estrogen mimics in hazard and risk assessment perspective.
ISSN: 1932-6203

hal-00877371
https://hal.archives-ouvertes.fr/hal-00877371
https://hal.archives-ouvertes.fr/hal-00877371/document
https://hal.archives-ouvertes.fr/hal-00877371/file/Screening_Estrogenic_Activities-accepted.pdf
DOI : 10.1371/journal.pone.0036069

Éditeur(s) : HAL CCSD
Résumé : International audience
Astrocytes send out long processes that are terminated by endfeet at the vascular surface and regulate vascular functions as well as homeostasis at the vascular interface. To date, the astroglial mechanisms underlying these functions have been poorly addressed. Here we demonstrate that a subset of messenger RNAs is distributed in astrocyte endfeet. We identified, among this transcriptome, a pool of messenger RNAs bound to ribosomes, the endfeetome, that primarily encodes for secreted and membrane proteins. We detected nascent protein synthesis in astrocyte endfeet. Finally, we determined the presence of smooth and rough endoplasmic reticulum and the Golgi apparatus in astrocyte perivascular processes and endfeet, suggesting for local maturation of membrane and secreted proteins. These results demonstrate for the first time that protein synthesis occurs in astrocyte perivascular distal processes that may sustain their structural and functional polarization at the vascular interface.
Cell Discovery

hal-01545319
https://hal.archives-ouvertes.fr/hal-01545319
DOI : 10.1038/celldisc.2017.5

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
A novel antimicrobial peptide, named Bicarinalin, has been isolated from the venom of the ant Tetramorium bicarinatum. Its amino acid sequence has been determined by de novo sequencing using mass spectrometry and by Edman degradation. Bicarinalin contained 20 amino acid residues and was C-terminally amidated as the majority of antimicrobial peptides isolated to date from insect venoms. Interestingly, this peptide had a linear structure and exhibited no meaningful similarity with any known peptides. Antibacterial activities against Staphylococcus aureus and S. xylosus strains were evaluated using a synthetic replicate. Bicarinalin had a potent and broad antibacterial activity of the same magnitude as Melittin and other hymenopteran antimicrobial peptides such as Pilosulin or Defensin. Moreover, this antimicrobial peptide has a weak hemolytic activity compared to Melittin on erythrocytes, suggesting potential for development into an anti-infective agent for use against emerging antibiotic-resistant pathogens.
ISSN: 0196-9781

hal-00996401
https://hal.archives-ouvertes.fr/hal-00996401
DOI : 10.1016/j.peptides.2012.08.018
PUBMED : 22960382

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Voting rules relying on k-nearest neighbors (k-NN) are an effective tool in countless many machine learning techniques. Thanks to its simplicity, k-NN classification is very attractive to practitioners, as it enables very good performances in several practical applications. However, it suffers from various drawbacks, like sensitivity to "noisy" instances and poor generalization properties when dealing with sparse high-dimensional data. In this paper, we tackle the k-NN classification problem at its core by providing a novel k-NN boosting approach. Namely, we propose a supervised learning algorithm, called Universal Nearest Neighbors (UNN), that induces a leveraged k-NN rule by globally minimizing a surrogate risk upper bounding the empirical misclassification rate over training data. Interestingly, this surrogate risk can be arbitrary chosen from a class of Bregman loss functions, including the familiar exponential, logistic and squared losses. Furthermore, we show that UNN allows to efficiently filter a dataset of instances by keeping only a small fraction of data. Experimental results on the synthetic Ripley's dataset show that such a filtering strategy is able to reject "noisy" examples, and yields a classification error close to the optimal Bayes error. Experiments on standard UCI datasets show significant improvements over the current state of the art.
ISSN: 0925-2312

hal-00664462
https://hal.inria.fr/hal-00664462

Éditeur(s) : Scientific Technical Research Council Turkey-tubitak
Résumé : In 2002, the Bosphorus outlet was mapped using an EM 300 multibeam echo-sounder together with a Chirp sonar system. This survey, carried out on board the Ifremer RV 'Le Suroit' in the frame of the BlaSON project, completes the data previously acquired directly at the mouth of the Bosphorus by Di Iorio et al. (1999) in the frame of a NATO SACLANT Undersea Research project using jointly the NATO RV Alliance, and the Turkish Navy Survey ship 'Cubuklu'. This acoustic imaging has identified a canyon system at the slope and a shallow marine fan, which contains shelf incisions extending the Istanbul Strait incision. Multibeam bathymetry, ultra-high resolution seismic profiling and coring correlations on this subaqueous fan area allowed reconstruction of morphology and patterns of sediment distribution indicative of high energy sediment transport processes. The discovery of a shallow water/shelf type fan directly off shore from the Bosphorus and connected to its outlet is consistent with the theories of sudden discharges of large volumes of water. Age dating obtained at the bottom of this subaqueous shelf fan yielded an age of 6700 yr C-14 BP (uncorrected age) for the first marine mollusc encountered at the base. This is in accordance with a last and abrupt reconnection of the Marmara Sea to the Black Sea. A detailed morphological map of the shelf and slope along with seismic profile interpretation and core correlation is presented here. A synthesis is proposed to explain the formation of this subaqueous fan and its relationship with the last connection between Black and Marmara seas aft er the Last Glacial Maximum. This interpretation can be summarized as follows: stage A corresponds to the first erosion surface seen on the shelf related to the Last Glacial Maximum low stand; stage B is the ravine surface onlapping to ca. -30, -40 m; stage C is a second erosional surface related to a sea level fall and eroding most of underlying Unit 1B; and stage D corresponds to the onset of the fan deposit during a period of high water run-off from the Black Sea entering from the Bosphorus. Avulsion branches show that this fan has been active for a long time.
Turkish Journal Of Earth Sciences (1300-0985) (Scientific Technical Research Council Turkey-tubitak), 2011 , Vol. 20 , N. 3 , P. 287-305

Droits : 2011 TÜBİTAK
http://archimer.ifremer.fr/doc/00036/14676/13677.pdf
http://archimer.ifremer.fr/doc/00036/14676/

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
Strain and strain rate partitioning in partially molten rocks are two of the important mechanisms that govern the process of coupling and/or decoupling of the partially molten lithosphere. Consequently, the proportion of partial melt and crystals and their network in partially molten rocks influence the degree of the partitioning along with the bulk rheology of the system. This study explores the possible role of finite strain and strain rate on the rate and volume of partial melting and crystallization in a metapelitic system undergoing deformation. Cylinders of synthetic quartz-muscovite aggregate (7: 3 volume ratio) were deformed in torsion at 750 C, 300 MPa and constant shear strain rate ((gamma) over dot = 3 x 10(-4) s(-1)) for finite shear strains (gamma) 1-15. The deformed samples were studied along the longitudinal tangential ( LT) and axial ( LA) sections to obtain the data along a range of strain rates for a given finite strain and vice versa. The results showed that deformation plays an important role on the kinetics of partial melting and crystallization. With increasing strain rate, amount and rate of crystallization comprise the volumetrically dominant process compared to partial melting at a given finite strain. In contrast, when the strain rate is constant, partial melting is the dominant process over crystallization up to moderate strain (gamma < 5). The dominant process reverses at higher strain, and the system shows more crystallization than partial melting. Application of the experimental data to geological systems implies that for metapelites a significant amount (similar to 20%) of partial melt can generate at high strain rate and moderate strain (gamma similar to 7), but at high strain (gamma = 15) the system is melt depleted. Under such conditions, decoupling should take place in brittle-ductile mode. On the other hand, rocks undergoing deformation with low strain rates and strain (gamma < 3) contain more than 25% partial melt, which can act as a major decoupling agent by localizing ductile shear zones.
ISSN: 0148-0227

hal-00617714
https://hal.archives-ouvertes.fr/hal-00617714
DOI : 10.1029/2010JB007865

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Rifting in a cratonic lithosphere is strongly controlled by several interacting processes including crust/mantle rheology, magmatism, inherited structure and stress regime. In order to better understand how these physical parameters interact, a 2 yr long seismological experiment has been carried out in the North Tanzanian Divergence (NTD), at the southern tip of the eastern magmatic branch of the East African rift, where the southward-propagating continental rift is at its earliest stage. We analyse teleseismic data from 38 broad-band stations ca. 25 km spaced and present here results from their receiver function (RF) analysis. The crustal thickness and Vp/Vs ratio are retrieved over a ca. 200 × 200 km2 area encompassing the South Kenya magmatic rift, the NTD and the Ngorongoro-Kilimanjaro transverse volcanic chain. Cratonic nature of the lithosphere is clearly evinced through thick (up to ca. 40 km) homogeneous crust beneath the rift shoulders. Where rifting is present, Moho rises up to 27 km depth and the crust is strongly layered with clear velocity contrasts in the RF signal. The Vp/Vs ratio reaches its highest values (ca. 1.9) beneath volcanic edifices location and thinner crust, advocating for melting within the crust. We also clearly identify two major low-velocity zones (LVZs) within the NTD, one in the lower crust and the second in the upper part of the mantle. The first one starts at 15–18 km depth and correlates well with recent tomographic models. This LVZ does not always coexist with high Vp/Vs ratio, pleading for a supplementary source of velocity decrease, such as temperature or composition. At a greater depth of ca. 60 km, a mid-lithospheric discontinuity roughly mimics the step-like and symmetrically outward-dipping geometry of the Moho but with a more slanting direction (NE–SW) compared to the NS rift. By comparison with synthetic RF, we estimate the associated velocity reduction to be 8–9 per cent. We relate this interface to melt ponding, possibly favouring here deformation process such as grain-boundary sliding (EAGBS) due to lithospheric strain. Its geometry might have been controlled by inherited lithospheric fabrics and heterogeneous upper mantle structure. We evidence that crustal and mantle magmatic processes represent first order mechanisms to ease and locate the deformation during the first stage of a cratonic lithospheric breakup.
ISSN: 0956-540X

hal-01622078
https://hal.archives-ouvertes.fr/hal-01622078
https://hal.archives-ouvertes.fr/hal-01622078/document
https://hal.archives-ouvertes.fr/hal-01622078/file/plasmanGJI2017.pdf
DOI : 10.1093/gji/ggx177