Éditeur(s) : HAL CCSD Elsevier
Résumé :  
Classifying species by shared life-history traits is important if common ecological response groups are to be identified among different species. We investigated how habitat area, local and regional factors shape plant communities in small isolated closed depressions, and how the species richness is related to the interplay between environmental factors and specific life-history trait combinations. In Central-Western Europe, 169 closed depressions were completely Surveyed for plant presence in two highly contrasted landscapes (forested and open landscapes). All species were clustered into 9 Emergent Groups based oil 10 life-history traits related to plant dispersal, establishment and persistence. Habitat areas were related to species presence using logistic regressions. Most Emergent Groups were more area-dependent in open than in forested landscapes, owing to heterogeneous light levels in forest weakening the species-area relationship. In open landscapes, Floating Hydrophytes were severely underrepresented in very small depressions, owing to the absence of waterfowl poulation. Local environmental and regional factors were related to species richness using Generalized Linear Models. In open landscapes, local environmental factors such as water conductivity or soil productivity are respectively the main predictors. In forested landscapes, the abundance of most Emergent Groups Was better predicted by regional factors, i.e., habitat connectivity and distance to the forest edge. Forested landscapes strongly impeded the closed depressions' colonization by the less mobile Emergent Groups Such as Large-seeded Perennials.
ISSN: 1146-609X

hal-01032144
https://hal.archives-ouvertes.fr/hal-01032144
DOI : 10.1016/j.actao.2009.02.002

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
UNLABELLED: ABSTRACT: BACKGROUND: Malaria is a major health issue in French Guiana. Amerindian communities remain the most affected. A previous study in Camopi highlighted the predominant role of environmental factors in the occurrence of malaria. However, all parameters involved in the transmission were not clearly identified. A new survey was conducted in order to clarify the risk factors for the presence of malaria cases in Camopi. METHODS: An open cohort of children under seven years of age was set up on the basis of biologically confirmed malaria cases for the period 2001-2009. Epidemiological and observational environmental data were collected using two structured questionnaires. Data were analysed with a multiple failures multivariate Cox model. The influence of climate and the river level on malaria incidence was evaluated by time-series analysis. Relationships between Anopheles darlingi human biting rates and malaria incidence rates were estimated using Spearman's rank correlation. RESULTS: The global annual incidence over the nine-year period was 238 per 1,000 for Plasmodium falciparum, 514 per 1,000 for Plasmodium visa and 21 per 1,000 for mixed infections. The multivariate survival analysis associated higher malaria incidence with living on the Camopi riverside vs. the Oyapock riverside, far from the centre of the Camopi hamlet, in a home with numerous occupants and going to sleep late. On the contrary, living in a house cleared of all vegetation within 50 m and at high distance of the forest were associated with a lower risk. Meteorological and hydrological characteristics appeared to be correlated with malaria incidence with different lags. Anopheles darlingi human biting rate was also positively correlated to incident malaria in children one month later. CONCLUSIONS: Malaria incidence in children remains high in young children despite the appearance of immunity in children around three years of age. The closeness environment but also the meteorological parameters play an important role in malaria transmission among children under seven years of age in Camopi.
ISSN: 1475-2875

inserm-00633771
http://www.hal.inserm.fr/inserm-00633771
http://www.hal.inserm.fr/inserm-00633771/document
http://www.hal.inserm.fr/inserm-00633771/file/1475-2875-10-246.pdf
DOI : 10.1186/1475-2875-10-246

Éditeur(s) : HAL CCSD
Résumé : French Guiana is a region located on the Guiana Shield in South America. Is presents at the same time a high originality in biodiversity, a good state of conservation and a strong correlation to Amazonian carbon stocks. Knowledge on evolution of the forest structure of French Guiana is however still insufficient to bring an optimal management at territory scale. Availability as never seen before of remote sensing data at high spatial resolution such as LiDAR, on large coverage, offers the opportunity to assess the forest resource in French Guiana. The work done during this thesis aim mostly to study the structure and the variations of the canopy height, the factors determining its variability and the consequences of forest logging activities. The data used during this thesis come from an airborne LiDAR and field data from Office National des Forêts (ONF). This thesis manuscript is divided in three parts. The first part introduces the problem and sets the objectives of the thesis. The second part takes the so-called "article" form, that is, the different chapters that compose it are scientific articles published or in the course of publication, it is composed of three studies (I) A study on the gaps detection and environmental determinants on the gap sizes distribution in natural forest: How to characterize the gap size distribution and are there environmental determinants that influence the statistical distribution of gap size? This article has been submitted in Biogeoscience. (ii) A study of the control of the environment on the canopy height structure and variations at different spatial resolutions. Which spatial scales are relevant for analyzing the environmental determinants of canopy height changes in tropical forests from remote sensing data? How can the environment help or not map the height of the canopy in the rainforest? This article was accepted for publication in Remote Sensing. (iii) a third study where we quantified the effects of Reduced Impact Logging (RIL) on the structure and variation of canopy height. What are the effects of logging on canopy height variations and gap size distribution? This article will be submitted for publication in a Forest Ecology and Management journal. In the last part, after a synthesis of the main results, we propose a conclusion.
La Guyane française est une région située sur le Plateau des Guyanes en Amérique du sud. Elle présente à la fois une grande originalité en termes de biodiversité, un bon état de conservation et une forte contribution au stock de carbone Amazonien. Les connaissances sur l’évolution de la structure forestière de la Guyane française restent cependant insuffisantes pour offrir une gestion optimale à l’échelle du territoire. La disponibilité sans précédent de données de télédétection à très haute résolution spatiale telles que le LiDAR , sur de larges couvertures nous offre l'opportunité d’évaluer la ressource forestière de la Guyane Française. Les travaux réalisés dans le cadre de cette thèse visent prioritairement à étudier la structure et les variations de la hauteur de canopée, les facteurs déterminant sa variabilité ainsi que les conséquences des activités d’exploitation forestière. Les données utilisées au cours de la thèse proviennent d’un LiDAR aéroporté et des données de terrains de l'Office National des Forêts (ONF). Ce manuscrit de thèse est divisé en trois grandes parties. La première partie introduit la problématique et fixe les objectifs de la thèse. La seconde partie prend la forme dite « sur article », c'est-à-dire que les différents chapitres qui la compose sont des articles scientifiques publiés ou en cours de publication, elle est composée de trois études. (i) Une étude concernant la détection des trouées et des déterminants environnementaux sur la distribution de tailles des trouées en forêt non exploitée : Comment caractériser la distribution de taille des trouées et est-ce qu’il y a des déterminants environnementaux qui influencent la distribution statistique de taille de trouées? Cet article à été soumis dans Biogeoscience. (ii) Une étude du contrôle de l'environnement sur la structure et les variations de la hauteur de canopée à différentes résolutions spatiales. Quelles échelles spatiales sont pertinentes pour analyser les déterminants environnementaux des variations de hauteur de la canopée en forêt tropicale à partir des données de télédétection ? Comment l’environnement peut aider, ou pas, à cartographier la hauteur de la canopée en forêt tropicale ? Cet article à été accepté pour publication dans Remote Sensing. (iii) Une troisième étude où nous avons quantifié les effets de l’exploitation à faible impact (EFI) sur la structure et la variation de la hauteur de canopée. Quelles sont les effets de l’exploitation forestière sur les variations de hauteur de canopée et sur la distribution de taille des trouées ? Cet article sera soumis pour publication dans une revue scientifique (Forest Ecology and Management). Dans la dernière partie, après une synthèse des principaux résultats, nous proposons des pistes de développement.
https://tel.archives-ouvertes.fr/tel-01527553

NNT : 2016YANE0006
tel-01527553
https://tel.archives-ouvertes.fr/tel-01527553
https://tel.archives-ouvertes.fr/tel-01527553/document
https://tel.archives-ouvertes.fr/tel-01527553/file/these-youven-goulamoussene2.pdf

Éditeur(s) : HAL CCSD Inter-Research
Résumé : International audience
Ecological connectivity is important for effective marine planning and biodiversity conservation. Our aim was to identify factors important in influencing variation in benthic community structure on shallow rocky reefs in 2 regions of the Mediterranean Sea with contrasting oceanographic regimes. We assessed beta (β) diversity at 146 sites in the littoral and shallow sub-littoral from the Adriatic/Ionian Seas (eastern region) and Ligurian/Tyrrhenian Seas (western region) using a null modelling approach to account for variation in species richness. The distance decay relationship between species turnover within each region and geographic distance by sea was determined using generalised linear models. Mantel tests were used to examine correlations between β diversity and connectivity by ocean currents, estimated from Lagrangian dispersal simulations. Variation in β diversity between sites was partitioned according to environmental and spatial components using a distance-based redundancy approach. Species turnover along a gradient of geographic distance was greater by a factor of 3 to 5 in the western region than the eastern region, suggesting lower con-nectivity between sites. β diversity was correlated with connectivity by ocean currents at both depths in the eastern region but not in the western region. The influence of spatial and environmental predictors of β diversity varied considerably between regions, but was similar between depths. Our results highlight the interaction of oceanographic, spatial and environmental processes influencing benthic marine β diversity. Persistent currents in the eastern region may be responsible for lower observed β diversity compared to the western region, where patterns of water circulation are more variable.
Marine Ecology Progress Series

Droits : http://creativecommons.org/licenses/by/
hal-01357935
https://hal-univ-perp.archives-ouvertes.fr/hal-01357935
https://hal-univ-perp.archives-ouvertes.fr/hal-01357935/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01357935/file/m553p001.pdf
DOI : 10.3354/meps11783

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Prostate cancer disparities have been reported in men of African descent who show the highest incidence, mortality, compared with other ethnic groups. Few studies have explored the genetic and environmental factors for prostate cancer in men of African ancestry. The glutathione-S-transferases family conjugates carcinogens before their excretion and is expressed in prostate tissue. This study addressed the role of GSTM1 and GSTT1 deletions on prostate cancer risk in populations of African descent. This multi-institutional case-control study gathered data from the Genetic Susceptibility to Environmental Carcinogens (GSEC) database, the African-Caribbean Cancer Consortium (AC3) and Men of African Descent and Carcinoma of the Prostate Consortium (MADCaP). The analysis included 10 studies (1715 cases and 2363 controls), five in African-Americans, three in African-Caribbean and two in African men. Both the GSTM1 and the GSTT1 deletions showed significant inverse associations with prostate cancer [odds ratio (OR): 0.90, 95% confidence interval (CI) 0.83-0.97 and OR 0.88, 95% CI: 0.82-0.96, respectively]. The association was restricted to Caribbean and African populations. A significant positive association was observed between GSTM1 deletion and prostate cancer in smokers in African-American studies (OR: 1.28, 95% CI: 1.01-1.56), whereas a reduced risk was observed in never-smokers (OR: 0.66, 95% CI: 0.46-0.95). The risk of prostate cancer increased across quartiles of pack-years among subjects carrying the deletion of GSTM1 but not among subjects carrying a functional GSTM1. Gene-environment interaction between smoking and GSTM1 may be involved in the etiology of prostate cancer in populations of African descent.
ISSN: 0143-3334

hal-00682901
https://hal.archives-ouvertes.fr/hal-00682901
DOI : 10.1093/carcin/bgr119
PUBMED : 21705483

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
The CoPanFlu-France cohort of households was set up in 2009 to study the risk factors for infection by the pandemic influenza virus (H1N1pdm) in the French general population. The authors developed an integrative data-driven approach to identify individual, collective and environmental factors associated with the post-seasonal serological H1N1pdm geometric mean titer, and derived a nested case-control analysis to identify risk factors for infection during the first season. This analysis included 1377 subjects (601 households). The GMT for the general population was 47.1 (95% confidence interval (CI): 45.1, 49.2). According to a multivariable analysis, pandemic vaccination, seasonal vaccination in 2009, recent history of influenza-like illness, asthma, chronic obstructive pulmonary disease, social contacts at school and use of public transports by the local population were associated with a higher GMT, whereas history of smoking was associated with a lower GMT. Additionally, young age at inclusion and risk perception of exposure to the virus at work were identified as possible risk factors, whereas presence of an air humidifier in the living room was a possible protective factor. These findings will be interpreted in light of the longitudinal analyses of this ongoing cohort.
ISSN: 1932-6203

Droits : http://creativecommons.org/licenses/by-sa/
hal-01122215
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01122215
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01122215/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01122215/file/journal.pone.0060127.pdf
PUBMED : 23613718

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
Local variation in the density of Anopheles mosquitoes and the risk of exposure to bites are essential to explain the spatial and temporal heterogeneities in the transmission of malaria. Vector distribution is driven by environmental factors. Based on variables derived from satellite imagery and meteorological observations, this study aimed to dynamically model and map the densities of Anopheles darlingi in the municipality of Saint-Georges de l’Oyapock (French Guiana). Longitudinal sampling sessions of An. darlingi densities were conducted between September 2012 and October 2014. Landscape and meteorological data were collected and processed to extract a panel of variables that were potentially related to An. darlingi ecology. Based on these data, a robust methodology was formed to estimate a statistical predictive model of the spatial-temporal variations in the densities of An. darlingi in Saint-Georges de l’Oyapock. The final cross-validated model integrated two landscape variables—dense forest surface and built surface—together with four meteorological variables related to rainfall, evapotranspiration, and the minimal and maximal temperatures. Extrapolation of the model allowed the generation of predictive weekly maps of An. darlingi densities at a resolution of 10-m. Our results supported the use of satellite imagery and meteorological data to predict malaria vector densities. Such fine-scale modeling approach might be a useful tool for health authorities to plan control strategies and social communication in a cost-effective, targeted, and timely manner.
ISSN: 1932-6203

hal-01383486
https://hal.archives-ouvertes.fr/hal-01383486
https://hal.archives-ouvertes.fr/hal-01383486/document
https://hal.archives-ouvertes.fr/hal-01383486/file/Adde_et_al_PlosONE_2016.pdf
DOI : 10.1371/journal.pone.0164685

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Children are exposed to toxic metals and metalloids via their diet and environment. Our objective was to assess the aggregate chronic exposure of children aged 3–6 years, living in France, to As, Cd, Cr, Cu, Mn, Pb, Sb, Sr, and V present in diet, tap water, air, soil and floor dust in the years 2007–2009. Dietary data came from the French Total Diet Study, while concentrations in residential tap water, soil and indoor floor dust came from the ‘Plomb-Habitat’ nationwide representative survey on children's lead exposure at home. Indoor air concentrations were assumed to be equal to outdoor air concentrations, which were retrieved from regulatory measurements networks. Human exposure factors were retrieved from literature. Data were combined with Monte Carlo simulations. Median exposures were 1.7, 0.3, 10.2, 34.1, 60.3, 0.7, 0.1, 44.3, 1.5 and 95th percentiles were 4.4, 0.5, 15.8, 61.3, 98.3, 2.5, 0.1, 111.1, 2.9 μg/kg bw/d for As, Cd, Cr, Cu, Mn, Pb, Sb, Sr, and V respectively. Dietary exposures dominate aggregate exposures, with the notable exception of Pb - for which soils and indoor floor dust ingestion contribute most at the 95th percentile. The strengths of this study are that it aggregates exposures that are often estimated separately, and uses a large amount of representative data. This assessment is limited to main diet and residential exposure, and does not take into account the relative bioavailability of compounds. These results could be used to help target prevention strategies.
ISSN: 0160-4120

inserm-01404061
http://www.hal.inserm.fr/inserm-01404061
http://www.hal.inserm.fr/inserm-01404061/document
http://www.hal.inserm.fr/inserm-01404061/file/rev1%20-%20MS%20Expo%20metals.pdf
DOI : 10.1016/j.envint.2016.10.009

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Humans are exposed to a large number of contaminants, many of which may have similar health effects. This paper presents a framework for identifying pollutants to be included in a cumulative risk assessment approach. To account for the possibility of simultaneous exposure to chemicals with common toxic modes of action, the first step of the traditional risk assessment process, i.e. hazard identification, is structured in three sub-steps: (1a) Identification of pollutants people are exposed to, (1b) identification of effects and mechanisms of action of these pollutants, (1c) grouping of pollutants according to similarity of their mechanism of action and health effects. Based on this exposure-based grouping we can derive "multi-pollutant" toxicity reference values, in the "dose-response assessment" step. The approach proposed in this work is original in that it is based on real exposures instead of a limited number of pollutants from a unique chemical family, as traditionally performed. This framework is illustrated by the case study of semi-volatile organic compounds in French dwellings, providing insights into practical considerations regarding the accuracy of the available toxicological information. This case study illustrates the value of the exposure-based approach as opposed to the traditional cumulative framework, in which chemicals with similar health effects were not always included in the same chemical class.
ISSN: 0013-9351

hal-00982315
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00982315
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00982315/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-00982315/file/An_exposure-based_framework_for_grouping_pollutants_accepted.pdf
DOI : 10.1016/j.envres.2014.01.007

Éditeur(s) : EDP Sciences
Résumé : A population of the invasive slipper limpet (Crepidula fornicata) has been spreading in the Bay of Mont-Saint-Michel (Western English Channel) for 40 years. Sidescan sonar, underwater video and quantitative sampling were conducted in 1996 and 2004 to document the widening geographic spread of the species over the bay. The limpet population grew by 50% during this period, to reach a fresh biomass of about 150 000 t. This local study analyses causes and effects of the spread and provides a typical example of the limpet spreading process. This population increase has significant effects on the environment in the most densely colonized area (modification to the sediment and biodiversity), leading to the emergence of a new benthic community. Anthropic dredging activities are among the causative factors of the spread but are also adversely affected by the invasion.
Depuis 40 ans, la population de crépidules (Crepidula fornicata) prolifère en baie du Mont Saint-Michel (Manche Ouest). Deux études réalisées en 1996 et 2004 ont permis de cartographier et d'estimer le stock de la population grâce à des moyens similaires : sonar à balayage latéral, vidéo sous-marine et prélèvements quantitatifs à la benne. Durant cet intervalle de temps, la biomasse a augmenté de 50 % pour atteindre 150 000 t dans la baie en 2004. Cette étude comparative a permis d'analyser les causes et les effets d'une telle prolifération et d'en montrer le processus général. Dans les secteurs fortement colonisés, les effets sur l'environnement sont particulièrement néfastes (modification du sédiment et de la biodiversité) et aboutissent à une nouvelle communauté benthique. Les activités de pêche aux engins traînants (dragues et chaluts) sont à la fois les principales responsables et les victimes de cette prolifération.
Aquatic Living Resources (0990-7440) (EDP Sciences), 2009 , Vol. 22 , N. 1 , P. 11-19

Droits : 2009 EDP Sciences
http://archimer.ifremer.fr/doc/2009/publication-6351.pdf
DOI:10.1051/alr/2009004
http://archimer.ifremer.fr/doc/00000/6351/

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
Giant earthquake (moment magnitude M-w >= 8.5) forecasts for subduction zones have been empirically related to both tectonic stresses and geometrical irregularities along the subduction interface. Both of these controls have been suggested as able to tune the ability of rupture to propagate laterally and, in turn, exert an important control on giant earthquake generation. Here we test these hypotheses, and their combined influence, by compiling a dataset of trench fill thickness (a proxy for smoothing of subducting plate relief by sediment input into the subduction channel) and upper plate strain (a proxy for the tectonic stresses applied to the subduction interface) for 44 segments of the global subduction network. We statistically compare relationships between upper plate strain, trench sediment thickness and maximal earthquake magnitude. We find that the combination of both large trench fill (>= 1 km) and neutral upper plate strain explains spatial patterns of giant earthquake occurrence to a statistically significant degree. In fact, the concert of these two factors is more highly correlated with giant earthquake occurrence than either factor on its own. Less frequent giant earthquakes of lower magnitude are also possible at subduction zones with thinner trench fill and compressive upper plate strain. Extensional upper plate strain and trench fill < 0.5 km appear to be unfavorable conditions, as giant earthquakes have not been observed in these geodynamical environments during the last 111 years. Citation: Heuret, A., C. P. Conrad, F. Funiciello, S. Lallemand, and L. Sandri (2012), Relation between subduction megathrust earthquakes, trench sediment thickness and upper plate strain, Geophys. Res. Lett., 39, L05304, doi: 10.1029/2011GL050712.
ISSN: 0094-8276

hal-00745636
https://hal.archives-ouvertes.fr/hal-00745636
https://hal.archives-ouvertes.fr/hal-00745636/document
https://hal.archives-ouvertes.fr/hal-00745636/file/heuretGRL2012.pdf
DOI : 10.1029/2011GL050712

Éditeur(s) : Pêche thonière et dispositifs de concentration de poissons, Caribbean-Martinique, 15-19 Oct 1999
Résumé : French Polynesia started it's Fish Aggregating Device programme in June 1981 with the positioning of the first buoy offshore of the main island of Tahiti. Since then, 251 structures have been installed throughout the 5 archipelagoes of this French overseas territory. The shape and size of the devices have evolved 8 times over this period, however, a single model has not yet been adopted. Trials are currently underway using lighter structures similar to those found in the Indian Ocean. The anchoring lines have progressively been modified through better knowledge of material and product availability, as well as better understanding of environmental constraints. The programme is entirely financed by the territorial government and managed by the public sector. This ongoing technical assistance, aimed towards the local small-scale coastal fishery, is considered an important factor to maintaining this activity alive. Up until 1997, this economical support policy of outer island populations far from the metropolis central town, along with incidental fishing methods around FADs, have given mitigated results without nevertheless putting into cause this programme. The use of 'drifting handlines' retained at the surface by small indicator floats are one of the contributing factors to the degradation of the anchor lines. It is now commonly accepted that a new fishing strategy must be adopted so that professional coastal fishermen become more aware with regards to an expensive work tool due to local bathymetric conditions, so that fishing effort is increased through the development of better adapted fishing techniques, and finally so that community spirit rules over individualism.Original Abstract: Le programme d'ancrage de DCP en Polynesie francaise a vu le jour en juin 1981 avec l'implantation d'un premier dispositif au large des cotes de Tahiti. Depuis cette date, ce sont 251 structures qui ont ete installees dans les cinq archipels de ce pays d'outre-mer. La forme et la taille des bouees ont evolue huit fois sans etre definitivement arretees a un seul modele et des essais sur des structures legeres de type " Ocean Indien " sont en cours. Les lignes d'ancrage ont fait l'objet de modifications progressives en raison de meilleures connaissances des produits ainsi que des contraintes du milieu environnant. Ce programme est finance en totalite par le territoire de la Polynesie francaise et gere par le secteur public. Il s'adresse a la pecherie artisanale et cotiere qui considere depuis de nombreuses annees cette assistance technique comme un atout indispensable au maintien de son activite. La politique d'engagement de ce soutien economique jusqu'en 1997 aupres des populations d'iles et atolls tres eloignes de la capitale ainsi que l'incidence de la technique de peche la plus repandue autour des DCP ont abouti a des resultats mitiges sans pour autant remettre en cause ce programme. En effet, les lignes a main derivantes et retenues en surface par une petite bouee temoin sont un des principaux facteurs de degradation des lignes d'ancrage. Il est desormais reconnu par tous les intervenants qu'une nouvelle strategie doit etre deployee afin que les pecheurs cotiers professionnels soient mieux responsabilises face a un outil de travail onereux en raison de la bathymetrie environnante, pour que l'effort de peche soit accru par l'utilisation de techniques de peche mieux adaptees, et enfin que l'esprit communautaire prime sur l'individualisme.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00042/15292/12649.pdf
http://archimer.ifremer.fr/doc/00042/15292/

Éditeur(s) : Elsevier
Résumé : The Danube Canyon is a large shelf-indenting canyon that has developed seaward of the late Pleistocene paleo-Danube valley. Mechanisms of canyon evolution and factors that controlled it are revealed by analyzing the morphology and the sedimentary structure of the canyon, as well as the main features of the continental margin around the canyon. This is based on investigation by swath bathymetry in the canyon area combined with different types of seismic data. The canyon is a major erosional trough with a flat bottom cut by an entrenched axial thalweg. The thalweg path varies from highly meandering to fairly straight in relation to the local gradient. Segments of the canyon are characterized by specific morphology, orientation and gradient along the axial thalweg. We interpret these segments in terms of canyon maturity. The sedimentary structure of the canyon documents an older phase of erosion followed by partial infilling, and thus attests for repeated cycles of canyon development. Canyon morphology is interpreted as a result of erosive sediment flows along the entrenched axial thalweg that caused downcutting into the canyon bottom and instability of the canyon walls, and hence enlargement of the canyon and expansion by headward erosion. During the last lowstand level of the Black Sea the canyon was located in an area of high sediment supply close to the paleo-Danube River mouths. This is indicated by buried fluvial channels on the shelf and by a wave-cut terrace associated with a water level situated about - 90 m below the present level. We infer that erosive flows in the canyon resulted from hyperpycnal currents at the river mouths, probably favored by the low salinity environment that characterized the Black Sea during lowstand times. Other mechanisms could have contributed to trigger sediment failure along the canyon, such as instability related to the presence of shallow gas, or the effect of a deep fault.
Marine Geology (0025-3227) (Elsevier), 2004-05 , Vol. 206 , N. 1-4 , P. 249-265

Droits : 2004 Elsevier B.V. All rights reserved
http://archimer.ifremer.fr/doc/2004/publication-476.pdf
DOI:10.1016/j.margeo.2004.03.003
http://archimer.ifremer.fr/doc/00000/476/

Éditeur(s) : HAL CCSD National Institute of Environmental Health Sciences (NIEHS) National Institute of Environmental Health Sciences
Résumé : International audience
Long-term exposure to persistent pollutants with hormonal properties (endocrine-disrupting chemicals, EDCs) may contribute to the risk of prostate cancer (PCa). However, epidemiological evidence remains limited. We investigated the relationship between PCa and plasma concentrations of universally widespread pollutants, in particular p,p'-dichlorodiphenyl dichloroethene (DDE) and the non-dioxin like polychlorinated biphenyl congener 153 (PCB153). We evaluated before treatment 576 men with newly diagnosed PCa and 655 controls in Guadeloupe (French West Indies). Exposure was analyzed according to case-control status. Associations were assessed by unconditional logistic regression analysis, controlling for confounding factors. Missing data were handled by multiple imputation. We estimated a significant positive association between DDE and PCa (adjusted odds ratio [OR] 1.53; 95% CI 1.02, 2.30 for the highest versus lowest quintile of exposure; PTrend = 0.01). PCB153 was inversely associated with PCa (OR 0.30; 95% CI 0.19, 0.47 for the highest versus lowest quintile of exposure values; PTrend < 0.001). Also, PCB153 was more strongly associated to low-grade than high grade PCa. Associations of PCa with DDE and PCB153 were in opposite directions. This may reflect differences in the mechanisms of action of these EDCs, and although our findings need to be replicated in other populations, they are consistent with complex effects of EDCs on human health.
ISSN: 0091-6765

hal-01118553
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01118553
DOI : 10.1289/ehp.1408407
PUBMED : 25493337

Éditeur(s) : Université de Bretagne Occidentale
Résumé : The major objectives of this thesis were to study the structure, functioning and dynamics of different faunal assemblages associated with cold seep ecosystems in the eastern Mediterranean Sea. We focused our study on three main sites: the Marmara Sea, the Mediterranean ridge and the Nile deep sea fan. This thesis aims at determining the environmental signature of Mediterranean sites and the characteristics of the associated fauna at European and global scales. The specific objectives were to (1) determine the composition, diversity, density, biomass of invertebrate assemblages, (2) characterize biogeochemical conditions within different microhabitats in the vicinity of organisms, (3) to define the trophic relationships amongst seep fauna using stable isotope analyses (collaboration) and lastly, (4) to compare the spatial distribution and assemblage characteristics at different spatial scales (local, structure-scale, regional). The results show that (1) the Napoli mud volcano is the richest structure in terms of numbers of taxa while the Nile deep-sea fan sites need additional sampling, (2) a high variability is observed both between the different microhabitats but also within a single microhabitat, (3) the methane and oxygen gradients as well as substratum type are the main structuring factors explaining the distribution of the fauna and (4) the characteristics of the microhabitats, rather than the study area, influence the structure of benthic communities associated with Mediterranean cold seeps.
Les objectifs principaux de cette thèse sont d’étudier la structure, le fonctionnement et la dynamique de différents assemblages de faune associée aux émissions de fluides froids de Méditerranée orientale. Trois principaux sites ont été étudiés : la mer de Marmara, la ride méditerranéenne et le delta profond du Nil. Cette thèse tente de déterminer la « signature environnementale » des sites méditerranéens et les caractéristiques de la faune qui y est associée dans un contexte de marges européennes et mondiale. Les objectifs spécifiques sont (1) de déterminer la composition, la diversité, la densité et la biomasse des assemblages d'invertébrés ; (2) de caractériser les conditions biogéochimiques au sein des différents microhabitats à proximité des organismes; (3) de caractériser les relations trophiques sur les différents assemblages de faune par une approche isotopique (en collaboration) et finalement, (4) de comparer la distribution spatiale et les caractéristiques des assemblages à différentes échelles spatiales (locale, à l’échelle d’une structure géologique, régionale). Les résultats montrent que : (1) le volcan de boue Napoli est le site le plus riche en taxons alors que les sites du delta du Nil nécessiteraient un échantillonnage plus approfondi ; (2) il existe une grande variabilité entre les microhabitats ainsi qu’au sein d’un même microhabitat ; (3) les gradients en méthane, en oxygène ainsi que la nature du substrat sont les principaux facteurs abiotiques expliquant la distribution de la faune, (4) les caractéristiques des microhabitats, plutôt que la zone d’étude, influencent la structure des communautés benthiques associées aux écosystèmes de fluides froids méditerranéens.

Droits : 2010 The Author, UBO
http://archimer.ifremer.fr/doc/00020/13138/10178.pdf
http://archimer.ifremer.fr/doc/00020/13138/

Éditeur(s) : HAL CCSD Tecpar
Résumé : International audience
The general structure and organization of the shallow water (<1.5 m) fish assemblages were studied in two southern Brazilian ecosystems, a bay and a lagoon, under different marine or continental influences. The abiotic factors were measured to define the hydrology of the sites and the biotic descriptors were evaluated to characterize the assemblage structures. Transparency, salinity and organic matter were the abiotic factors which best distinguished the sites. A total richness of 69 species was observed. Ecological guilds, density, diversity and evenness indices values were different in each site. Hydrodynamism and geomorphology determined the structure and the organization of the fish assemblages in these shallow waters. It was observed that variations in the hydrological attributes generated by the marine or continental water movements are able to alter the conditions in the lagoon more quickly and at more regular frequencies than those in the bay.
ISSN: 1516-8913

hal-00753018
https://hal.univ-antilles.fr/hal-00753018
https://hal.univ-antilles.fr/hal-00753018/document
https://hal.univ-antilles.fr/hal-00753018/file/BRAZILIAN_2010.pdf

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : Society's needs for a network of in situ ocean observing systems cross many areas of earth and marine science. Here we review the science themes that benefit from data supplied from ocean observatories. Understanding from existing studies is fragmented to the extent that it lacks the coherent long-term monitoring needed to address questions at the scales essential to understand climate change and improve geo-hazard early warning. Data sets from the deep sea are particularly rare with long-term data available from only a few locations worldwide. These science areas have impacts on societal health and well-being and our awareness of ocean function in a shifting climate. Substantial efforts are underway to realise a network of open-ocean observatories around European Seas that will operate over multiple decades. Some systems are already collecting high-resolution data from surface, water column, seafloor, and sub-seafloor sensors linked to shore by satellite or cable connection in real or near-real time, along with samples and other data collected in a delayed mode. We expect that such observatories will contribute to answering major ocean science questions including: How can monitoring of factors such as seismic activity, pore fluid chemistry and pressure, and gas hydrate stability improve seismic, slope failure, and tsunami warning? What aspects of physical oceanography, biogeochemical cycling, and ecosystems will be most sensitive to climatic and anthropogenic change? What are natural versus anthropogenic changes? Most fundamentally, how are marine processes that occur at differing scales related? The development of ocean observatories provides a substantial opportunity for ocean science to evolve in Europe. Here we also describe some basic attributes of network design. Observatory networks provide the means to coordinate and integrate the collection of standardised data capable of bridging measurement scales across a dispersed area in European Seas adding needed certainty to estimates of future oceanic conditions. Observatory data can be analysed along with other data such as those from satellites, drifting floats, autonomous underwater vehicles, model analysis, and the known distribution and abundances of marine fauna in order to address some of the questions posed above. Standardised methods for information management are also becoming established to ensure better accessibility and traceability of these data sets and ultimately to increase their use for societal benefit. The connection of ocean observatory effort into larger frameworks including the Global Earth Observation System of Systems (GEOSS) and the Global Monitoring of Environment and Security (GMES) is integral to its success. It is in a greater integrated framework that the full potential of the component systems will be realised. Crown Copyright (C) 2011 Published by Elsevier Ltd. All rights reserved.
Progress In Oceanography (0079-6611) (Pergamon-elsevier Science Ltd), 2011-10 , Vol. 91 , N. 1 , P. 1-33

Droits : 2011 Published by Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00044/15557/15923.pdf
DOI:10.1016/j.pocean.2011.05.001
http://archimer.ifremer.fr/doc/00044/15557/

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : Growth defense tradeoff theory predicts that plants in low-resource habitats invest more energy in defense mechanisms against natural enemies than growth, whereas plants in high-resource habitats can afford higher leaf loss rates. A less-studied defense against herbivores involves the synchrony of leaf production, which can be an effective defense strategy if leaf biomass production exceeds the capacity of consumption by insects. The aim of this study was to determine whether leaf synchrony varied across habitats with different available resources and whether insects were able to track young leaf production among tree habitat specialists in a tropical forest of French Guiana. We predicted that high-resource habitats would exhibit more synchrony in leaf production due to the low cost and investment to replace leaf tissue. We also expected closer patterns of leaf synchrony and herbivory within related species, assuming that they shared herbivores. We simultaneously monitored leaf production and herbivory rates of five pairs of tree species, each composed of a specialist of terra firme or white-sand forests within the same lineage. Our prediction was not supported by the strong interaction of habitat and lineage for leaf synchrony within individuals of the same species; although habitat specialists differed in leaf synchrony within four of five lineages, the direction of the effect was variable. All species showed short time lags for the correlation between leaf production and herbivory, suggesting that insects are tightly tracking leaf production, especially for the most synchronous species. Leaf synchrony may provide an important escape defense against herbivores, and its expression appears to be constrained by both evolutionary history and environmental factors.
ISSN: 1385-0237

hal-01204221
https://hal.archives-ouvertes.fr/hal-01204221
DOI : 10.1007/s11258-013-0290-y
PRODINRA : 288500

Éditeur(s) : HAL CCSD Society for the Study of Reproduction
Résumé : International audience
Spermmotility notably depends on the structural integrity of the flagellum and the regulation ofmicrotubule dynamics. Although researchers have started to use " omics" techniques to characterize the human sperm's molecular landscape, the constituents responsible for the assembly, organization, and dynamics of the flagellum microtubule have yet to be fully defined. In this study, we defined a core set of 116 gene products associated with the human sperm microtubulome (including products potentially involved in abnormal ciliary phenotypes and male infertility disorders). To this end, we designed and applied an integrated genomics workflow and combined relevant proteomics, transcriptomics, and interactomics datasets to reconstruct a dynamic interactome map. By further integrating phenotypic information, we defined a disease-interaction network; this enabled us to highlight a number of novel factors potentially associated with altered sperm motility and male fertility. Lastly, we experimentally validated the expression pattern of two candidate genes (CUL3 and DCDC2C) that had never previously been associated with male germline differentiation. Our analysis suggested that CUL3 and DCDC2C's products have important roles in the sperm flagellum. Taken as a whole, our results demonstrate that an integrated genomics strategy can highlight relevant molecular factors in specific sperm components. This approach could be easily extended by including other " omics" data (from asthenozoospermic men, for example) and identifying other critical proteins from the human sperm microtubulome. Summary Sentence Although researchers have started to use "omics" techniques to characterize the human sperm's molecular landscape, the constituents responsible for the assembly, organization, and dynamics of the flagellum microtubule have yet to be fully defined.
ISSN: 0006-3363

hal-01515563
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01515563
DOI : 10.1095/biolreprod.116.143479
PUBMED : 28395323

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le patrimoine et le tourisme sont des facteurs avérés de développement. De leur bonne exploitation peut contribuer à l’amélioration des conditions d’existence des populations locales. L’Est-Cameroun est le fief de ressources naturelles et culturelles d’une étonnante diversité pouvant impulser une forte activité touristique. Cependant, même si cette région reçoit chaque année des touristes nationaux et étrangers, elle ne peut pas se targuer de faire profiter sa population des effets directs, indirects et induits qu’engendrerait une activité touristique convenablement menée. Le présent article expose, dans une perspective historique (1980-2010), les raisons pour lesquelles, le tourisme et le développement de l’Est-Cameroun piétinent en dépit de ses nombreuses ressources patrimoniales.La collecte des données (écrites, orales, iconographiques, électroniques) sur le terrain de recherche associée à l’observation permet de constater que le tourisme fut très vite relégué au second plan. L’exploitation minière et forestière intensive, au lieu de faciliter l’émergence de la région, a plutôt hypothéquée son avenir. Le rôle des agences chargées de la gestion du tourisme à l’Est-Cameroun s’est limité à l’inventaire des sites touristiques, l’aménagement sporadique de quelques-uns et la mise en œuvre d’actions promotionnelles approximatives. La négligence du tourisme par les autorités camerounaises n’est pas une nouveauté ; elle a pour corollaire l’apparition de difficultés diverses (braconnage, manque de personnel, insécurité…).
Heritage and tourism are recognized factors of development. Their good exploitation can contribute to the improvement of the conditions of existence of local populations. East-Cameroon is the fief of natural and cultural resources which can stimulate tourism. Although even if this region receives every year domestic and foreign tourists, its population cannot profit from direct, indirect and induced effects which would engender a suitably led tourist activity. The present article exposes, in a historical perspective (1980-2010), reasons why, tourism and development of East-Cameroon tramples in spite of its numerous heritage resources. The data collection (written, oral, iconographic, electronic…) on the research filed and personal observation allow to notice that tourism was very fast relegated in East-Cameroon. The intensive mining and forest exploitation have hypothecated the future of this area instead of developing it. Moreover, the role of tourism agencies in eastern Cameroon is limited itself to inventory of places of interest, sporadic development and approximate promotional actions. The negligence of tourism by the Cameroon authorities is not novelty; it has for corollary appearance of difficulties (as poaching, lack of personal, insecurity).
Cameroun

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.9453
http://journals.openedition.org/etudescaribeennes/9453