Éditeur(s) : HAL CCSD Oxford Journals
Résumé : International audience
Background - Several studies have investigated the implication of biological and environmental factors on geographic variations of end-stage renal disease (ESRD) incidence at large area scales, but none of them assessed the implication of neighbourhood characteristics (healthcare supply, socio-economic level and urbanization degree) on spatial repartition of ESRD. We evaluated the spatial implications of adjustment for neighbourhood characteristics on the spatial distribution of ESRD incidence at the smallest geographic unit in France.Methods - All adult patients living in Bretagne and beginning renal replacement therapy during the 2004–09 period were included. Their residential address was geocoded at the census block level. Each census block was characterized by socio-economic deprivation index, healthcare supply and rural/urban typology. Using a spatial scan statistic, we examined whether there were significant clusters of high risk of ESRD incidence.Results - The ESRD incidence was non-randomly spatially distributed, with a cluster of high risk in the western Bretagne region (relative risk, RR = 1.28, P-value = 0.0003). Adjustment for sex, age and neighbourhood characteristics induced cluster shifts. After these adjustments, a significant cluster (P = 0.013) persisted.Conclusions - Our spatial analysis of ESRD incidence at a fine scale, across a mixed rural/urban area, indicated that, beyond age and sex, neighbourhood characteristics explained a great part of spatial distribution of ESRD incidence. However, to better understand spatial variation of ESRD incidence, it would be necessary to research and adjust for other determinants of ESRD.
Clinical Kidney Journal

hal-01118626
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01118626
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01118626/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01118626/file/Spatial%20distribution%20of%20end-stage%20renal%20disease.pdf
DOI : 10.1093/ckj/sfu131

Éditeur(s) : HAL CCSD
Résumé : Over the last decade, distance-based methods have been introduced and then improved in the field of spatial economics to gauge the geographic concentration of activities. There is a growing literature on this theme including new tools, discussions on their specific properties and various applications. However, there is currently no typology of distance-based methods. This paper fills that gap. The proposed classification helps understand all the properties of distance-based methods and proves that they are variations on the same framework.
https://halshs.archives-ouvertes.fr/halshs-00679993

halshs-00679993
https://halshs.archives-ouvertes.fr/halshs-00679993
https://halshs.archives-ouvertes.fr/halshs-00679993v6/document
https://halshs.archives-ouvertes.fr/halshs-00679993/file/MARCON-PUECH-Hal%2000679993v6.pdf

Éditeur(s) : HAL CCSD Wiley-Blackwell
Résumé : International audience
The spatio‐temporal dynamics of disease spread provide an area of acute scientific interest but substantial analytic challenges. Analytic approaches need to draw from current knowledge of disease systems yet be flexible enough to provide targeted inference without restrictive assumptions. We explore this balance in detail with respect to the observed pattern of spread of sugarcane yellow leaf virus, the causal agent of yellow leaf disease. This disease affects cultivated sugarcane plants and spreads via an aphid vector (Melanaphis sacchari). The system is of considerable economic interest, but presents several analytic complications. First, the plants begin as well separated individuals that grow into large plants with overlapping leaf canopies enabling increased vector access between neighbouring plants. The overlap between neighbouring plants first occurs within rows and then extends between rows, presenting another interesting spatial component to consider when modelling the propagation of infection. Second, the vector initially flies between plants but at some point sheds wings and shifts to walking between plants. We are particularly interested in how these two features of the system and their interrelation may impact the spatial spread of disease over time. In addition, we also explore the impact of potential immigration of infected vectors from outside of the study area. We treat our observed cane field as a spatial grid with regular spacing between rows and smaller spacing within rows. Our data consist of observed disease status of each of 1643 plants at each of six time points. We provide descriptive summaries of the temporal evolution of spatial pattern in infection, then propose hierarchical models to describe the pattern and capture the influence of the ecological and environmental factors listed above.
ISSN: 0143-9782

hal-00684235
https://hal.archives-ouvertes.fr/hal-00684235

Éditeur(s) : Elsevier Science Bv
Résumé : Coastal and estuarine systems provide nursery grounds for many marine fish species. Their productivity has been correlated with terrigeneous inputs entering the coastal-estuarine benthic food web, thereby favouring the establishment of fish juveniles. Studies in these ecosystems often describe the nursery as a single large habitat without verifying nor considering the presence of contiguous habitats. Our study aimed at identifying different habitats based on macrozoobenthic communities and morpho-sedimentary characteristics and assessing the trophic interactions between fish juveniles and their benthic preys within these habitats. It included 43 sampling sites covering 5 habitats in which we described taxonomically and quantitatively the invertebrates and fish communities with stable isotopes and gut contents. It suggested that the benthic common sole Solea solea displayed feeding plasticity at the population level, separating the juveniles (G0) from the older fish (G1) into different "feeding sub-populations". Size-based feeding plasticity was also observable in the spatial occupancy of that species in the studied bay. The demersal pouting, Trisopterus luscus, equally used the different habitats but displayed low feeding plasticity across and inside each habitat. Stable isotopes proved to be powerful tools to study the spatial distribution of trophic interactions in complex ecosystems like the bay of Vilaine and to define optimal habitats for fish that use the coastal-estuarine ecosystem as nursery grounds.
Journal Of Sea Research (1385-1101) (Elsevier Science Bv), 2013-08 , Vol. 81 , P. 40-48

Droits : 2013 Elsevier B.V. All rights reserved
http://archimer.ifremer.fr/doc/00151/26226/24327.pdf
DOI:10.1016/j.seares.2013.03.013
http://archimer.ifremer.fr/doc/00151/26226/

Éditeur(s) : HAL CCSD
Résumé : International audience
In the analysis of coastal hazards, the features of extreme waves are determining information to question the impact of storms to the coast. The spatial behaviour of extreme waves is even more valuable especially since it is sparsely provided. Regarding recent applications in other contexts, a kind of statistical models called max-stable processes is relevant for modelling spatial extreme events. Max-stable processes are extensions of the well-known Generalised Extreme Value (GEV) distribution. Unlike univariate approaches, max-stable processes consider spatial dependence of a phenomenon. Such a modelling also overtakes a standard multivariate approach by providing information continuously over the area studied, even where no observation is available. Relying on such a stochastic modelling, the aim of this study is to discuss the extreme waves hazards in the Gulf of Lions, focusing on their spatial behaviour.
34th Conference on Coastal Engineering
Seoul, South Korea

lirmm-01382568
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01382568
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01382568/document
https://hal-lirmm.ccsd.cnrs.fr/lirmm-01382568/file/7553-31212-1-PB.pdf
DOI : 10.9753/icce.v34.management.17

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
In a study of a 15-year-old pasture in Martinique (French West Indies), abundance and organization of microarthropod communities were correlated with the spatial distribution of the earthworm Polypheretima elongata (Megascolecidae). In patches of high earthworm density (133 individuals m-2), microarthropod density was significantly higher (80 000 individuals m-2) than in patches with few earthworms (31 worms m-2 and 49 000 microarthropods m-2). The diversity of microarthropod communities followed a similar pattern, the Shannon index for Collembola communities being, respectively, 3.12 and 1.82 in and outside earthworm patches. These results suggest that mesofauna abundance and diversity might be at least partly determined by the activity of larger invertebrates, as a result of the dramatic effects that the latter group exerts upon soil structure, pore distribution and food resources.
ISSN: 0178-2762

hal-00505427
https://hal.archives-ouvertes.fr/hal-00505427
https://hal.archives-ouvertes.fr/hal-00505427/document
https://hal.archives-ouvertes.fr/hal-00505427/file/Loranger_et_al._1998b.pdf
DOI : 10.1007/s003740050394

Éditeur(s) : Public Library Science
Résumé : The European Union and other states are moving towards Ecosystem Based Fisheries Management to balance food production and security with wider ecosystem concerns. Fishing is only one of several sectors operating within the ocean environment, competing for renewable and non-renewable resources that overlap in a limited space. Other sectors include marine mining, energy generation, recreation, transport and conservation. Trade-offs of these competing sectors are already part of the process but attempts to detail how the seas are being utilised have been primarily based on compilations of data on human activity at large spatial scales. Advances including satellite and shipping automatic tracking enable investigation of factors influencing fishers' choice of fishing grounds at spatial scales relevant to decision-making, including the presence or avoidance of activities by other sectors. We analyse the determinants of English and Welsh scallop-dredging fleet behaviour, including competing sectors, operating in the eastern English Channel. Results indicate aggregate mining activity, maritime traffic, increased fishing costs, and the English inshore 6 and French 12 nautical mile limits negatively impact fishers' likelihood of fishing in otherwise suitable areas. Past success, net-benefits and fishing within the 12 NM predispose fishers to use areas. Systematic conservation planning has yet to be widely applied in marine systems, and the dynamics of spatial overlap of fishing with other activities have not been studied at scales relevant to fisher decision-making. This study demonstrates fisher decision-making is indeed affected by the real-time presence of other sectors in an area, and therefore trade-offs which need to be accounted for in marine planning. As marine resource extraction demands intensify, governments will need to take a more proactive approach to resolving these trade-offs, and studies such as this will be required as the evidential foundation for future seascape planning.
Plos One (1932-6203) (Public Library Science), 2015-01-27 , Vol. 10 , N. 1 , P. 1-14

Droits : 2015 Tidd et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
http://archimer.ifremer.fr/doc/00254/36518/35064.pdf
DOI:10.1371/journal.pone.0116335
http://archimer.ifremer.fr/doc/00254/36518/

Éditeur(s) : Edp Sciences S A
Résumé : This paper provides an overview of the progress Ifremer has made recently in fisheries acoustics and the study of small pelagic fish by: i) pushing observation frontiers using a range of platforms including an autonomous underwater vehicle, AUV, ii) developing measuring instruments and methods and iii) studying fish distributions. Presently, information from several frequencies of single-beam echosounders is routinely collected together with data from the ME70 multibeam echosounder. For onboard data acquisition control the HERMES software was developed. The new MOVIES 3D software includes modules for simultaneous realistic 3D visualisation and post-processing such as bottom detection, school extraction and calculation of descriptors and integration of all acoustic data. Several data analysis methods are being developed and some initial results are presented. Finally, results on the spatial distribution of small pelagic fish schools in the Bay of Biscay illustrate the role that acoustics can play, and are already playing, in the implementation of an ecosystem approach to fisheries.
Cet article présente une vue d’ensemble des avancées récentes de l’Ifremer en acoustique halieutique et une étude des petits poissons pélagiques tenant compte : i) de l’extension des limites de l’observation, en utilisant une gamme diverse de plates-formes dont un engin sous-marin autonome (AUV), ii) des développements méthodologiques et d’instruments de mesures, iii) de l’étude de la répartition des poissons. Désormais, les données de plusieurs fréquences des sondeurs mono-faisceaux sont collectées en routine en parallèle à celles du sondeur multifaisceau ME70. Le logiciel HERMES a été développé pour le contrôle de l’acquisition des données à bord. Le nouveau logiciel MOVIES 3D comprend des modules de visualisation réaliste en 3D et de post-traitement (dont la détection du fond, l’extraction de bancs et le calcul de leurs descripteurs ainsi que l’intégration de toutes les données acoustiques). Plusieurs méthodes d’analyse de données sont en cours de développement et quelques premiers résultats sont présentés. Enfin, les résultats relatifs à la répartition spatiale des bancs de petits poissons pélagiques dans le golfe de Gascogne illustrent le rôle actuel et potentiel de l’acoustique dans la mise en place d’une approche écosystémique des pêches.
Aquatic Living Resources (0990-7440) (Edp Sciences S A), 2009-10 , Vol. 22 , N. 4 , P. 433-445

Droits : EDP Sciences, IFREMER, IRD 2009
http://archimer.ifremer.fr/doc/00000/11165/7517.pdf
DOI:10.1051/alr/2009027
http://archimer.ifremer.fr/doc/00000/11165/

Éditeur(s) : Inter-research
Résumé : Mixed beds of Ophiocomina nigra and Ophiothrix fragilis (Echinodermata, Ophiuroidea) are usually predominated by O. fragilis and are reported to be stable over time. The Bay of Brest (Brittany, France) is a highly productive ecosystem where both species co-occur in the main central part. Using a geostatistical approach, we tested for changes in O. nigra and O. fragilis density and total biomass patterns between 1987 and 2011. Our results highlighted an increase in O. nigra population size and the induction of a spatial shift of the co-occurring O. fragilis. O. nigra increased similar to 5 times in density and covered almost all the study area, while its density-dependent biomass increased similar to 3 times (22 t km(-2), ash-free dry mass) between 1987 and 2011. Overall, the O. fragilis population decreased in density by similar to 30%, but its total biomass did not change over time. The current distribution pattern revealed a clear spatial exclusion of O. fragilis from the central part of the study area toward the southern part, overlapping beds of dead slipper limpet Crepidula fornicata, which were formerly considered to be the dominant suspension-feeder species in the bay. The success of O. nigra colonization is linked to its biological and functional traits, as well as deep changes in food supply over the studied period. Ecological consequences of such a large change in the benthic compartment of the bay are explored in the light of associated changes in environmental patterns.
Marine Ecology-progress Series (0171-8630) (Inter-research), 2012 , Vol. 460 , P. 79-90

Droits : 2012 Inter-Research
http://archimer.ifremer.fr/doc/00090/20136/17782.pdf
DOI:10.3354/meps09784
http://archimer.ifremer.fr/doc/00090/20136/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This paper describes an operational protocol for integrating conservation and restoration with land-use planning in islands. Conservation challenges are intensified in insular systems due to higher ecosystem vulnerability, limited spatial options, low data availability, rapid land-use change and, globally, short-term vision planning. Our operational planning protocol integrates ecological and socio-economic factors to identify the best spatial options for conserving and restoring biodiversity, inside and outside extant reserves, while minimising future land-use conflicts. Conservation and restoration targets are formulated for species, habitats and ecological processes that support biodiversity. An optimal network of priority sites is selected to achieve those targets across the landscape. The prioritisation process integrates a Conservation Costs Index to optimise conservation and restoration investments. We discuss the outcomes of the planning protocol in terms of site prioritisation, stakeholders' participation and general implications for spatial planning in insular systems. As with many islands, the study area of Réunion Island has experienced rapid urban and agricultural expansion, which threatens its unique biodiversity. Forty three per cent of the island is currently protected in a National Park but only half of this reserve network contributes to the achievement of targets. An additional 21% of land should be conserved mainly to ensure the persistence of ecological connections between the marine, terrestrial and freshwater realms. Finally we emphasize that our method doesn't substitute the land-use planning debate but is aimed to better prepare the conservation sector for negotiating future land-use allocation with other socio-economic sectors in islands
Landscape and Urban Planning

halsde-00676425
https://hal.archives-ouvertes.fr/halsde-00676425
DOI : 10.1016/j.landurbplan.2011.02.004

Éditeur(s) : Estuaries Research Federation
Résumé : Estuarine systems are complex environments where seasonal and spatial variations occur in concentrations of suspended particulate matter, in primary constituents, and in organic matter content. This study investigated in the laboratory the flocculation potential of estuarine-suspended particulate matter throughout the year in order to better identify the controlling factors and their hierarchy. Kinetic experiments were performed in the lab with a "video in lab" device, based on a jar test technique, using suspended sediments sampled every 2 months over a 14-month period at three stations in the Seine estuary (France). These sampling stations are representative of (1) the upper estuary, dominated by freshwater, and (2) the middle estuary, characterized by a strong salinity gradient and the presence of an estuarine turbidity maximum. Experiments were performed at a constant low turbulent shear stress characteristic of slack water periods (i.e., a Kolmogorov microscale > 1,000 A mu m). Flocculation processes were estimated using three parameters: flocculation efficiency, flocculation speed, and flocculation time. Results showed that the flocculation that occurred at the three stations was mainly influenced by the concentration of the suspended particulate matter: maximum floc size was observed for concentrations above 0.1 g l(-1) while no flocculation was observed for concentrations below 0.004 g l(-1). Diatom blooms strongly enhanced flocculation speed and, to a lesser extent, flocculation efficiency. During this period, the maximum flocculation speed of 6 A mu m min(-1) corresponded to a flocculation time of less than 20 min. Salinity did not appear to automatically enhance flocculation, which depended on the constituents of suspended sediments and on the content and concentration of organic matter. Examination of the variability of 2D fractal dimension during flocculation experiments revealed restructuring of flocs during aggregation. This was observed as a rapid decrease in the floc fractal dimension from 2 to 1.4 during the first minutes of the flocculation stage, followed by a slight increase up to 1.8. Deflocculation experiments enabled determination of the influence of turbulent structures on flocculation processes and confirmed that turbulent intensity is one of the main determining factors of maximum floc size.
Estuaries and coasts : Journal of the Estuarine Research Federation (1559-2723) (Estuaries Research Federation), 2009-07 , Vol. 32 , N. 4 , P. 678-693

Droits : 2009 Springer
http://archimer.ifremer.fr/doc/2009/publication-6631.pdf
DOI:10.1007/s12237-009-9160-1
http://archimer.ifremer.fr/doc/00000/6631/

Éditeur(s) : Actes du 6e colloque national BRG, La Rochelle, 2-3-4 octobre 2006
Résumé : Previous studies have shown heritable variation in larval developmental traits in the Pacific oyster Crassostrea gigas. In order to study the genetic consequences of production of oyster larvae in hatcheries, two factors, specific to hatcheries, were examined: the effect of discarding the smallest larvae (i.e. culling) and the effect of temperature (20°C versus 26°C). A mixed-family approach was used in order to infer the genetic composition of larval populations and family assignment, limiting possible environmental bias and allowing the study of a relatively large number of families using a limited number of larval tanks. Our results show that three multiplexed highly polymorphic microsatellite markers are a powerful tool for family assignment and, consequently, for the study of bivalve larvae genetics. Culling, by selective sieving of the smallest larvae is an advantageous practice at a phenotypic scale as it reduced variance in larval size, variance of developmental rate and time to settlement. Culling of 50% of the larval population only led to 15% less spat, showing a positive phenotypic correlation between larval growth and settlement success. However, culling represents a substantial risk for diversity loss, because it increases the variance of reproductive success among parental oysters. The effective population sizes of early settling cohorts of settlement were lower than those of later ones. Our results show that the settlement of slow growing larvae significantly contributes to minimizing the variability of reproductive success and therefore to maximizing genetic diversity. These results corroborate the low estimations of variability of broodstocks sampled in several French commercial hatcheries, relative to natural populations. The genetic composition of the larval population and the resulting spat was significantly different between the two tested temperatures, revealing genotype x environment interaction for survival. Similarly, genotype x environment interaction was also observed for larval growth as a higher temperature exerted a positive influence on the expression of genetic variability for this trait. Consequently, we can conclude that a temperature of 26°C coupled with culling, to common practice in oyster hatcheries, is likely to amplify the selection pressure for fast growing larvae. To test for this hypothesis, we compared larval developmental traits in the progeny of a hatchery broodstock closed for 7 generations, with the progeny of wild oysters and the two possible hybrids. Our results show that selection of fast growing larvae can counteract presumed inbreeding depression, due to higher mean relatedness among hatchery broodstock than in the wild. Genetic effects of intensive rearing conditions at larval stage are significant and should be taken into account in hatchery practices, especially in terms of genetic diversity management.
Afin d'étudier les conséquences génétiques des pratiques de production en écloserie d'huître creuse, deux facteurs ont été examinés : l'élimination des petites larves et la température. Nos résultats montrent que l'assignation de parenté par marqueurs microsatellites est un outil performant pour les études génétiques en phase larvaire de familles élevées en mélange. Bien qu'avantageux d'un point de vue phénotypique, le tamisage sélectif représente un risque de perte de diversité. La fixation des larves à croissance lente permet en effet de minimiser la variabilité du succès reproducteur et de fait, de maximiser la variabilité génétique. Ces résultats corroborent les estimations de variabilité sur les stocks d'écloseries françaises où l'on constate une diversité allélique inférieure à celle de populations issues du milieu naturel. La température exerce également une influence sur la précocité de l'expression de la variabilité génétique pour la croissance larvaire. Ainsi une température élevée associée à une procédure de tamisage peut amplifier l'effet sélectif. Enfin, la sélection de larves à croissance rapide semble démontrée, s'opposant à la dépression de consanguinité présumée. Les conditions d'élevage peuvent donc avoir un effet génétique significatif qui devrait être pris en considération dans les pratiques d'écloserie, notamment dans la gestion de la diversité génétique.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2006/acte-1505.pdf
http://archimer.ifremer.fr/doc/00000/1505/

Éditeur(s) : Amer Geophysical Union
Résumé : Large rivers are key hydrologic components in oceanography, particularly regarding air-sea and land-sea exchanges and biogeochemistry. We enter now in a new era of Sea Surface Salinity (SSS) observing system from Space with the recent launches of the ESA Soil Moisture and Ocean Salinity (SMOS) and the NASA Aquarius/Sac-D missions. With these new sensors, we are now in an excellent position to revisit SSS and ocean color investigations in the tropical northwest Atlantic using multi-year remote sensing time series and concurrent in situ observations. The Amazon is the world's largest river in terms of discharge. In its plume, SSS and upper water column optical properties such as the absorption coefficient of colored detrital matter (acdm) are strongly negatively correlated (<-0.7). Local quasi-linear relationships between SSS and acdm are derived for these plume waters over the period of 2010-2013 using new spaceborne SSS and ocean color measurements. Results allow unprecedented spatial and temporal resolution of this coupling. These relationships are then used to estimate SSS in the Amazon plume based on ocean color satellite data. This new product is validated against SMOS and in situ data and compared with previously developed SSS retrieval models. We demonstrate the potential to estimate tropical Atlantic SSS for the extended period from 1998 to 2010, prior to spaceborne SSS data collection.
Journal Of Geophysical Research-oceans (0148-0227) (Amer Geophysical Union), 2015-05 , Vol. 120 , N. 5 , P. 3177-3192

Droits : 2015. American Geophysical Union. All Rights Reserved.
http://archimer.ifremer.fr/doc/00255/36610/35742.pdf
DOI:10.1002/2014JC010109
http://archimer.ifremer.fr/doc/00255/36610/

Éditeur(s) : HAL CCSD The Royal Society
Résumé : International audience
Conservation commonly requires trade-offs between social and ecological goals. For tropical small-scale fisheries, spatial scales of socially appropriate management are generally small— the median no-take locally managed marine area (LMMA) area throughout the Pacific is less than 1 km 2. This is of particular concern for large coral reef fishes, such as many species of grouper, which migrate to aggregations to spawn. Current data suggest that the catchment areas (i.e. total area from which individuals are drawn) of such aggregations are at spatial scales that preclude effective community-based management with no-take LMMAs. We used acoustic telemetry and tag-returns to examine reproductive migrations and catchment areas of the grouper Epinephelus fuscoguttatus at a spawning aggregation in Papua New Guinea. Protection of the resultant catchment area of approximately 16 km 2 using a no-take LMMA is socially untenable here and throughout much of the Pacific region. However, we found that spawning migrations were skewed towards shorter distances. Consequently, expanding the current 0.2 km 2 no-take LMMA to 1–2 km 2 would protect approximately 30–50% of the spawning population throughout the non-spawning season. Contrasting with current knowledge, our results demonstrate that species with moderate reproductive migrations can be managed at scales congruous with spatially restricted management tools.
ISSN: 2054-5703

Droits : http://creativecommons.org/licenses/by/
hal-01297717
https://hal-univ-perp.archives-ouvertes.fr/hal-01297717
https://hal-univ-perp.archives-ouvertes.fr/hal-01297717/document
https://hal-univ-perp.archives-ouvertes.fr/hal-01297717/file/150694.full.pdf
DOI : 10.1098/rsos.150694

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : En mettant côte à côte les modèles de construction des habitations sucrières caribéennes et des cités ouvrières métropolitaines, on constate de troublantes similitudes entre ces deux systèmes sociospatiaux. Chacun des modèles correspond à un stade différencié de l’expansion du capitalisme industriel : l’hypothèse défendue ici consiste à montrer que le discours hygiéniste serait venu occulter le recouvrement de ces deux modèles de logement patronaux, parce que le premier était largement entaché par la « question esclavagiste » dont l’industrialisme métropolitain, incarné dans le second, souhaitait se débarrasser. Et l’occultation de cette part d’héritage dans la mémoire du modèle des cités ouvrières pourrait s’expliquer par la cécité dont a longtemps été saisie la société française quant à son passé esclavagiste puis colonial. Ce lien entre les deux modèles sociospatiaux ne semble d’ailleurs faire l’objet d’aucune construction patrimoniale, dans le monde industrialisé comme dans la Caraïbe, alors même que chaque modèle pris isolément tendrait à se patrimonialiser.
When the building models of living quarters on Caribbean sugar plantations are compared to workers’ housing estates in Metropolitan France, we find unsettling similarities between the two socio-spatial systems. The models each correspond to a different stage in the spread of industrial capitalism: the hypothesis advanced here argues that “hygienist” discourse could have worked to obscure the overlap between these two models of company-owned housing since the former was sullied by the “slavery issue” from which Metropolitan industrialism, embodied by the latter, wanted to distance itself. The omission of this aspect of its heritage from the memory of the workers’ housing estate model may be explained by French society’s long-standing refusal to acknowledge its slavery-based and then colonial past. The connection between these two socio-spatial models does not appear to be of interest in the heritage-making process in either the industrialised world or the Caribbean despite the fact that each model on its own is beginning to be recognised as part of the local heritage.
Caraïbes

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.10317
http://journals.openedition.org/etudescaribeennes/10317

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
We study diffusion in a heterogeneous medium that is characterized by spatially varying diffusion properties from a random walk point of view. We show that an inhomogeneous continuous time random walk (CTRW) with a spatially variable exponential transition time distribution solves the spatially discretized heterogeneous diffusion equation. This demonstrates the equivalence of the widely used time-domain random walk (TDRW) scheme and spatially inhomogeneous CTRW and at the same time provides a demonstration of the formal equivalence of the TDRW particle formulation and the heterogeneous diffusion equation. Based on this equivalence, we develop a TDRW method for heterogeneous diffusion under spatially variable multirate mass transfer properties. We discuss the implementation of these schemes and study the diffusion behavior in the presence of traps that are characterized by a truncated power-law trapping time distribution.
ISSN: 0309-1708

hal-00767566
https://hal.archives-ouvertes.fr/hal-00767566
DOI : 10.1016/j.advwatres.2012.07.015

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
This study demonstrates that 20-100 GHz range can be used for spatially-accurate focusing of heating inside the skin achieved by varying frequency and exposure beam size, as well as by enforcing air convection. The latter is also used to reduce overheating of skin surface. Heating at different skin depths depending on these parameters is investigated in detail using the hybrid bio-heat equation. In particular, it is shown that decreasing frequency and/or increasing exposure beam size at forced airflow result in elevation of heating of deeper layers of tissue and decrease of skin surface temperature. Changes of water content within 15%, which exceed those due to aging and presence of tumors, only slightly affect heating. Exposure intensity necessary to reach a target temperature significantly increases in different areas of body with elevated blood flow. Dependence on exposure intensity and hyperthermia treatment duration is also investigated and discussed. Results of this study suggest that the lower part of the millimeter-wave range is an attractive alternative for non-invasive thermal treatment of skin cancer with a high spatial resolution. Bioelectromagnetics. 36:464-475, 2015. © 2015 Wiley Periodicals, Inc
ISSN: 0197-8462

hal-01187403
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01187403
DOI : 10.1002/bem.21929
PUBMED : 26179286

Éditeur(s) : Inter-Research
Résumé : The spatial structure of demersal fish assemblages on the continental shelf of the NW Mediterranean Sea was examined on a large scale between the Straits of Gibraltar and the Gulf of Lions. In contrast to its predominant role in the spatial distribution of species composition, described worldwide, it seems depth has only a limited effect on the distribution patterns of the total abundance and diversity of demersal fishes. In addition, evidence is provided for the division of the whole study area into 3 geographical fish assemblages. The influence of Atlantic inputs and the semi-permanent Almena-Oran hydrographic front play a key role in defining the Alboran Sea as a specific fish fauna area. Moreover, the clear differentiation between 2 distinct assemblages in the Gulf of Lions and the Catalan Sea could be partly linked to the North Balearic front. These results contribute to the current debate on the definition of spatial units for the purpose of demersal fisheries management. They also stress the complexity of developing an ecosystem approach which deals simultaneously with species composition and biodiversity aspects of ecosystems management.
Marine Ecology Progress Series (0171-8630) (Inter-Research), 2005-08 , Vol. 297 , P. 245-257

Droits : Inter-Research 2005
http://archimer.ifremer.fr/doc/2005/publication-3623.pdf
DOI:10.3354/meps297245
http://archimer.ifremer.fr/doc/00000/3623/

Éditeur(s) : Université Bretagne Ouest
Résumé : This work deals with the fishing effects on the diversity dynamics of demersal fish communities, focusing on the biotic interactions. Multispecies indices are used in order to characterize the demersal fish community dynamics of the Bay of Biscay and of the Gulf of Lions. These are the diversity indices, the temporal variability of the total biomass and of the slope of the number size spectra and the slope of the species-area curves (spatial segregation). The yearly bottom trawl surveys EVHOE, CHALIST and MEDITS, carried out in these two areas since 1983 by IFREMER for the stocks assessment provide the data. The differences between areas are related to a fishing index (mean value of the annual landings of demersal fish per surface area). Other areas are included in the analysis when the index values are available from the published literature (North Sea, Scotian Shelf, Kenya, French Guyana). It is argued from the diversity indices analysis that the Gulf of Lions community is more diverse and less disturbed than the Bay of Biscay one. This result is not consistent with a fishing effect but with biogeography. The total biomass variability and the slope variability of size spectra are higher in the most harvested areas than in the least ones. On the contrary, the species-area slope is the lowest in the most harvested areas. Theoretically, biotic interactions decrease the total biomass variability and the spectra slope variability because of compensations and increase the species area slope because of competitive exclusion. It is concluded that harvesting alters biotic interactions and favour local coexistence by decreasing competitive exclusion. The species diversity maintenance depends on competitive exclusion. Hence, biodiversity is threatened not only by a direct fishing effect but also by a dynamics alteration.
Ce mémoire aborde le problème de l'impact de l'exploitation par la pêche sur la dynamique de diversité des peuplements de poissons démersaux. Les effets de la pêche sur le rôle des interactions biotiques entre espèces dans la dynamique des peuplements sont plus particulièrement analysés à l'aide de descripteurs multispécifiques. Les descripteurs utilisés sont les indices de diversité, la variabilité temporelle de la biomasse totale et de la pente multispécifique du spectre de poids et la pente des droites d'accumulation d'espèces mesurant la ségrégation spatiale. Les valeurs de ces indices sont calculées à partir des données de campagnes annuelles de chalutage de fond EVHOE, CHALIST et MEDITS, menées par l'IFREMER depuis 1983 pour l'évaluation des ressources halieutiques dans le golfe de Gascogne et dans le golfe du Lion. Les différences de caractéristiques de dynamique entre les deux peuplements révélées par ces descripteurs sont mises en relation avec un indice d'exploitation (valeur moyenne des débarquements annuels, divisée par la surface du plateau de la région concernée). D'autres régions ont été intégrées dans cette analyse lorsque les valeurs des indicateurs étaient disponibles dans la littérature (Mer du Nord, plateau de Nouvelle-Ecosse, Kenya et Guyane Française). Les indices de diversité utilisés permettent de mettre en évidence que le peuplement du golfe du Lion est plus diversifié et moins soumis à perturbations que celui du golfe de Gascogne. Ces caractéristiques semblent dues à l'histoire biogéographique de ces deux régions et non à un effet de la pêche. La variabilité de la biomasse totale et celle de la pente du spectre multispécifique augmentent depuis les régions les moins exploitées vers les plus exploitées. A l'inverse, la ségrégation spatiale diminue. En théorie, les interactions entre espèces diminuent la variabilité temporelle de la biomasse totale et de la pente du spectre multispécifique, à cause de compensations entre espèces, et augmentent la ségrégation spatiale par exclusion compétitive. L'interprétation donnée des résultats obtenus est ainsi une altération des interactions entre les espèces par l'exploitation. En prélevant de la biomasse, l'exploitation augmente la disponibilité des ressources pour les individus non pêchés. En conséquence, l'exclusion compétitive diminue et la coexistence locale des individus est facilitée. A long terme, la diversité est donc menacée, non seulement par raréfaction des espèces prélevées par l'exploitation mais aussi parce que les interactions sont altérées et que le maintien de la diversité en dépend pour partie.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2000/these-6670.pdf
http://archimer.ifremer.fr/doc/00000/6670/

Éditeur(s) : Elsevier Science Inc
Résumé : The sex-determining system of Crassostrea gigas is still poorly known, especially regarding the potential influence of temperature. In order to address this question, mRNA expressions of actors of the molecular cascade (Cg-DMI, Cg-SoxE, Cg-beta-catenin, Cg-Foxl2/Cg-FoxI2os) and of Oyvlg, a germ cell marker, were investigated by real-time PCR in spat grown at different temperatures (18, 22, 25 and 28 degrees C). In parallel, gonadic differentiation, gametogenesis and sex ratios were assessed by histology at each of these temperatures. Whatever the temperature, Cg-DMI, Cg-SoxE, Cg-beta-catenin and Oyvlg expressions peaked at the same developmental stage, always after Cg-Foxl2/Cg-Foxl2os (around 40-44 dpf for spat grown at 18 degrees C). Temperatures increased the kinetics of first gonadic differentiation and gametogenesis. At 25 degrees C a significant switch occurred in sex ratio towards males and in the balance of expression between male and female genes, in favor of males. A slight gametogenesis disturbance was also observed. These results strengthen the hypotheses about the sex-determining time window and molecular cascade governing the development of C gigas, with notably the involvement of Cg-Foxl2/Cg-Foxl2os in the very early steps. They also suggest an influence of temperature on the oyster's sex determination which, associated to genetic control, would induce a mixed sex determination system (GSD +TSD). (C) 2013 Elsevier Inc. All rights reserved.
Comparative Biochemistry And Physiology A-molecular & Integrative Physiology (1095-6433) (Elsevier Science Inc), 2013-05 , Vol. 165 , N. 1 , P. 61-69

Droits : 2013 Elsevier Inc. All rights reserved
http://archimer.ifremer.fr/doc/00136/24767/22874.pdf
DOI:10.1016/j.cbpa.2013.02.007
http://archimer.ifremer.fr/doc/00136/24767/