Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : Isozyme markers were used to characterize levels of diversity, genotypic structure and spatial genetic structure for the low-density tree species, Carapa procera (five adults per ha), within 300 ha of a continuous tropical rain forest stand. Both seed and adult stages were investigated, a high level of genetic diversity being found in both. Fixation indices showed excess homozygosity in seeds, and excess heterozygosity in adults, which might be caused by selection in favour of heterozygotes. Autocorrelation analysis of the spatial distribution of genotypes revealed no significant pattern in adults or in seeds before dispersal, and there was a high variability in correlogram shapes among alleles. This suggests that gene flow is extensive in C. procera, probably mainly through long-distance pollen dispersal, as seed dispersal is expected to be rather limited in this species (maximum distances of about 50 m). No clear-cut spatial pattern was observed in pollen allele frequencies, which supports the hypothesis of extensive pollen flow. This overall lack of structure is consistent with the data already available on the mating system of this predominantly outcroissing species.
ISSN: 0018-067X

hal-01032057
https://hal.archives-ouvertes.fr/hal-01032057
DOI : 10.1038/hdy.1997.124

Éditeur(s) : HAL CCSD Springer Verlag (Germany) Springer Verlag
Résumé : International audience
We report here U-series and trace element data for an olivine-melilitite lava flow, erupted in 1957 in the Virunga volcanic field and known as the Mugogo eruption. Petrological and geochemical data show that the Mugogo magma represents a primary mantle melt, derived from a low degree of melting of a metasomatised mantle source. It is highly enriched in very incompatible trace elements (e.g. more than 300-fold compared to primitive mantle for Th), with a distinctly lower enrichment in Rb, Ba and Sr. The high Th/U and low (230Th/232Th) ratios (4.4 and 0.750, respectively, with a (230Th/238U) ratio of 1.09) are close to the values found for the Nyamuragira basanites. But the most striking feature is the very low (226Ra/230Th) ratio of 0.48, the lowest ever measured in a mafic volcanic rock. The most probable origin of this Ra deficit is the presence of phlogopite (having a high Ra partition coefficient) in the lithospheric mantle, either as a residual phase during low-degree isobaric melting (in batch-melting or a diffusion-controlled melting models), or in a phlogopite-bearing upper mantle through which the melt migrates and equilibrates (in an equilibrium porous flow model commonly used to describe adiabatic melting). The disequilibrium pattern (230Th) > (238U) > (210Pb) ≫ (226Ra), reversed compared to the pattern observed in the Oldoinyo Lengai natrocarbonatite, suggests that a carbonatite melt might have been involved to explain the Ra deficit. We thus discuss the possibility of an early separation of a Ra-enriched carbonate melt either from the olivine-melilitite melt or from a carbonated mantle source, followed by the production of a low-degree melt of olivine-melilitite composition, but the lack of available experimental, petrological and geochemical evidences makes this process somewhat speculative at present. Further studies of recent (<5 ky) olivine-melilitites are needed to check whether the large Ra deficit is a general characteristic of this type of magma that can be used to constrain models of its formation.
ISSN: 0010-7999

hal-01174173
https://hal.archives-ouvertes.fr/hal-01174173
DOI : 10.1007/s00410-015-1124-9

Éditeur(s) : HAL CCSD
Résumé : Understanding of the mechanisms driving diversification of species is a significant way to improve the management of ecosystems, predict the impacts of climate change and understand the actual and past biodiversity level. The aim of this thesis is to understand and comprehend genetic mechanisms behind the diversification of species in the presence of gene flow. This thesis is focused on the biological model Symphonia globulifera, which presents two ecotypes: the S.globulifera, specialist of seasonally flooded lowlands and S.sp1, specialist of terra firme. These two ecotypes show low genetic differentiation, despite the presence of two apparent phenotypes. A first part of this thesis was to test the presence of local adaptation of this using reciprocal transplant experiment gardens, allowing the understanding of the ecotypes distributions in their natural habitats. Then, this local adaptation in the presence of gene flow, directed me to the regulation of gene methylation in order to see the role this brand of epigenetics can have in the divergence of the ecotypes. In a third part of the thesis, new generation sequencing of the transcriptome ecotypes in reciprocal gardens transplantations allowed me to show the evidence of gene regulation to differentiate the ecotypes. This work thesis is based on phenotype records data, AFLP genotyping and high-throughput sequencing of the transcriptome, in order to show the important value of gene regulation in the divergence of the locally adapted ecotypes, and a weak role of DNA methylation in the establishment of local adaptation.
Connaitre et appréhender les mécanismes de la diversification des espèces est important pour la gestion des écosystèmes, la prévision des impacts des changements climatiques et la compréhension de la biodiversité actuelle et passée. Le but de cette thèse est de comprendre et de déceler les mécanismes génétiques à l’origine de la diversification des espèces en présence de flux de gènes. Cette thèse se focalise sur le modèle biologique Symphonia globulifera, qui compte deux écotypes : le S.globulifera spécialiste de la terra firme et le S.sp1, spécialiste des bas-fonds. Ces deux écotypes montrent une faible différenciation génétique, malgré la présence de deux phénotypes différents.Une première étape a été de mettre en évidence la présence d’une adaptation locale au sein de cette espèce, par le biais d’une expérimentation de jardins de transplantation réciproques, permettant d’expliquer la répartition des écotypes dans leur habitat naturel. Ensuite, dans le but d’identifier les mécanismes sous-jacent à cette adaptation locale, j’ai testé l’hypothèse que la méthylation des gènes pourrait être une marque de l’épigénétique contribuant à la divergence des écotypes, par l’utilisation d’enzyme sensibles à la méthylation dans un protocole de génotypage AFLP. Enfin, un séquençage haut-débit du transcriptome des écotypes en jardins de transplantation réciproques m’a permis de mettre en évidence une expression différentielle des gènes entre les écotypes, qui pourrait expliquer les différences phénotypiques observées entre les écotypes malgré une faible différentiation génétique. Ces travaux de thèse s’appuie, ainsi, sur des données de traits phénotypiques, de génotypage AFLP et de séquençage à haut débit du transcriptome pour montrer la valeur importante de la régulation des gènes dans la divergence des écotypes adaptés localement, et un faible rôle de la méthylation de l’ADN dans l’établissement cette adaptation locale.
https://tel.archives-ouvertes.fr/tel-01405400

NNT : 2015YANE0005
tel-01405400
https://tel.archives-ouvertes.fr/tel-01405400
https://tel.archives-ouvertes.fr/tel-01405400/document
https://tel.archives-ouvertes.fr/tel-01405400/file/these_-_tinaut.pdf

Éditeur(s) : HAL CCSD IOS Press
Résumé : International audience
The hematocrit-to-viscosity ratio (HVR) has been widely used has an estimate of red blood cell (RBC) oxygen transport effectiveness into the microvasculature or as an oxygen delivery index. However, no study investigated the possibility of HVR to truly reflect RBC oxygen transport effectiveness or to be an oxygen delivery index. We measured blood viscosity at high shear rate (225 s −1), hematocrit, HVR, as well as the microvascular oxyhemoglobin saturation (TOI; tissue oxygen index) by spatial resolved near-infrared spectroscopy (NIRS) at cerebral and muscle levels in three population known to have various degrees of hemorheological abnormalities: healthy subjects (AA), patients with sickle cell SC disease (SC) characterized by moderate anemia and patients with sickle cell anemia (SS) marked by severe anemia. At both the cerebral and muscle level, HVR was positively correlated with TOI (r = 0.28; p = 0.03 and r = 0.38; p = 0.003, at the cerebral and muscle level, respectively). These findings suggest that HVR probably play a key role in blood flow and hemodynamic regulation in the microvasculature, hence modulating the amount of oxygen available for tissues. Nevertheless, the strengths of the associations are weak (R 2 < 0.50), suggesting that other determinants modulate microvascular blood flow and oxygenation, such as vascular geometry and vasomotor reserve.
ISSN: 1386-0291

hal-01163460
https://hal.univ-antilles.fr/hal-01163460
DOI : 10.3233/CH-131742

Éditeur(s) : HAL CCSD Wiley-Blackwell
Résumé : International audience
In the Oman ophiolite, the large scale Makhibiyah shear zone, in Wadi Tayin massif was generated with no or little relative motion between the two adjacent blocks, in contrast with what is reported from otherwise similar shear zones in deep crust and upper mantle. This shear zone is asymmetrical with, along one margin an asthenospheric mantle (similar to 1200 degrees C) and along the adjacent margin, a lithospheric mantle (similar to 1000 degrees C). Within the hotter side and with increasing shear strain, horizontal flow lines smoothly swing towards the shear zone direction before abutting against the wall of the lithosphere side. Profuse mafic melts issued from the hotter mantle are frozen in the shear zone by cooling along this lithospheric wall. Tectonic and magmatic activities are entirely localized within the asthenospheric compartment. Mantle flow lines were rotated, during their channelling along this NW-SE shear zone, in the NW and SE opposite directions. Depending on whether the flow lines are deviated NW or SE, dextral or sinistral shear sense is recorded in the shear band mylonitic peridotites. This demonstrates that the shear zone was not generated by strike-slip motion, a conclusion supported by regional observations.
ISSN: 0954-4879

hal-00411334
https://hal.archives-ouvertes.fr/hal-00411334
DOI : 10.1111/j.1365-3121.2008.00806.x

Éditeur(s) : Elsevier
Résumé : This study aimed to analyze the role river floods play in triggering gravity flows and to investigate the role of submarine canyon systems as a conduit for terrigenous material to the deep sea. Two years of measurements in the Var canyon at depths ranging from 1200 m to 2350 m indicate that six floods of the Var River triggered hyperpycnal flows, an important mechanism for transporting particulate matter to the deep-sea floor. These sediment gravity flows were characterized by a sudden increase of current velocity that lasted 8 to 22 h and by downward particle fluxes that reached up to 600 g m(-2)d(-1) of particles and 3.1 g m(-2)d(-1) in terms of organic carbon. These large inputs of sediment and organic carbon may have a significant impact on deep-sea ecosystems and carbon storage in the Mediterranean Sea.
Marine Geology (0025-3227) (Elsevier), 2009-07 , Vol. 263 , N. 1-4 , P. 1-6

Droits : 2009 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/2009/publication-6640.pdf
DOI:10.1016/j.margeo.2009.03.014
http://archimer.ifremer.fr/doc/00000/6640/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
In this paper, we present new data from 226Ra–230Th dating and archaeomagnetism with the aim of improving the knowledge of the flank eruptions that occurred at Mt Etna during the Greek–Roman and Early Medieval periods, as defined in the new geological map of the volcano. The combination of the two dating techniques demonstrates that three major flank eruptions occurred on the lower north and west flanks during Greek–Roman epochs, producing large scoria cones and extensive lava flows. In particular, the Mt Ruvolo and Mt Minardo events highly impacted the territory of the west flank, notably by damming the Simeto River. The new data of the Millicucco and Due Monti lava flows, on the lower north–east flank, indicate a younger age than their stratigraphic ages quoted in the 2011 geological map, since they occurred around 700 and 500 AD, respectively. None of the large flank eruptions occurring on the lower slopes of Etna during the Early Medieval age are reported in the historical sources. Overall, our paper shows that a comprehensive assessment of eruptions at Mount Etna in the last three millennia can only be achieved through a multidisciplinary approach.
ISSN: 0377-0273

hal-01277929
https://hal.archives-ouvertes.fr/hal-01277929
DOI : 10.1016/j.jvolgeores.2015.09.002

Éditeur(s) : HAL CCSD
Résumé : International audience
Abstract A careful re-examination of the well-known written documents pertaining to the 2,750-year-long historical period of Mount Etna was carried out and their interpretation checked through the high-accuracy archeomagnetic method (>1,200 large samples), combined with the 226Ra-230Th radiochronology. The magnetic dating is based upon secular variation of the direction of the geomagnetic field (DGF) and estimated to reach a precision of  ±40 years for the last 1,200 years, and ±100 to 200 years up to circa 150 B.C. Although less precise, the 226Ra-230Th method provides a unique tool for distinguishing between historic and prehistoric lavas, which in some cases might have similar DGFs. We show that despite the abundance of details on ancient historical eruptions, the primary sources of information are often too imprecise to identify their lava flows and eruptive systems. Most of the ages of these lavas, which are today accepted on the geological maps and catalogues, were attributed in the 1800s on the basis of their morphology and without any stratigraphical control. In fact, we found that 80% of the “historically dated” flows and cones prior to the 1700s are usually several hundreds of years older than recorded, the discrepancies sometimes exceeding a millennium. This is proper the case for volcanics presumed of the “1651 east” (actually ∼1020), “1595” (actually two distinct flows, respectively, ∼1200 and ∼1060), “1566” (∼1180), “1536” (two branches dated ∼1250 and ∼950), “1444” (a branch dated ∼1270), “1408” (lower branches dated ∼450 and ∼350), “1381” (∼1160), “1329” (∼1030), “1284” (∼1450 and ∼700), “1169 or 812” (∼1000) eruptions. Conversely, well-preserved cones and flows that are undated on the maps were produced by recent eruptions that went unnoticed in historical accounts, especially during the Middle Ages. For the few eruptions that are recorded between A.D. 252 and 750 B.C., none of their presumed lava flows shows a DGF in agreement with that existing at their respective dates of occurrence, most of these flows being in fact prehistoric. The cinder cones of Monpeloso (presumed “A.D. 252”) and Mt. Gorna (“394 B.C.”), although roughly consistent magnetically and radiochronologically with their respective epochs, remain of unspecified age because of a lack of precision of the DGF reference curve at the time. It is concluded that at the time scale of the last millennia, Mount Etna does not provide evidence of a steady-state behavior. Periods of voluminous eruptions lasting 50 to 150 years (e.g., A.D. 300–450, 950–1060, 1607–1669) are followed by centuries of less productive activity, although at any time a violent outburst may occur. Such a revised history should be taken into account for eruptive models, magma output, internal plumbing of the volcano, petrological evolution, volcano mapping and civil protection.
Bulletin of Volcanology / Bull Volcanic Eruptions

hal-00315967
https://hal.archives-ouvertes.fr/hal-00315967
DOI : 10.1007/s00445-007-0121-x

Éditeur(s) : HAL CCSD AGU and the Geochemical Society
Résumé : International audience
How reliable are shear wave splitting measurements as a means of determining mantle flow direction? This remains a topic of debate, especially in the context of subduction. The answer hinges on whether our current understanding of mineral physics provides enough to accurately translate between seismic observations and mantle deformation. Here, we present an integrated model to simulate strain-history-dependent texture development and estimate resulting shear wave splitting in subduction environments. We do this for a mantle flow model that, in its geometry, approximates the double-sided Molucca Sea subduction system in Eastern Indonesia. We test a single-sided and a double-sided subduction case. Results are compared to recent splitting measurements of this region by Di Leo et al. (2012a). The setting lends itself as a case study, because it is fairly young and, therefore, early textures from the slab's descent from the near surface to the bottom of the mantle transition zone--which we simulate in our models--have not yet been overprinted by subsequent continuous steady state flow. Second, it allows us to test the significance of the double-sided geometry, i.e., the need for a rear barrier to achieve trench-parallel subslab mantle flow. We demonstrate that although a barrier amplifies trench-parallel subslab anisotropy due to mantle flow, it is not necessary to produce trench-parallel fast directions per se. In a simple model of A-type olivine lattice-preferred orientation and one-sided subduction, trench-parallel fast directions are produced by a combination of simple shear and extension through compression and pure shear in the subslab mantle.
ISSN: 1525-2027

hal-01053506
https://hal.archives-ouvertes.fr/hal-01053506
DOI : 10.1002/2013GC005032

Éditeur(s) : Elsevier
Résumé : Analysis of new high-resolution seismic-reflection profiles, chirp profiles and previously published sidescan data, together with piston cores on the Danube Fan provide new insight into the recent sedimentation processes in the deep northwestern Black Sea.The latest channel-levee system on the Danube Fan developed probably during the Neoeuxinian lowstand (oxygene isotope stage 2) in a semi-freshwater basin with a water level about 100 m lower than today. Sediment supplied by the Danube was transported to the deep basin through the Viteaz Canyon, which was directly connected to the leveed channel of this system on the middle slope. Channel avulsion was common in the middle fan, as indicated by four main phases of bifurcation. Each phase developed after the same pattern: breaching of the lower and narrower left levee by turbidity currents, building of a unit of High Amplitude Reflection Packets (HARP) by the unchannelized flow while the former channel was abandoned, followed by initiation of a new meandering leveed channel. The northward migration through successive bifurcations is influenced by the asymmetry between levees, hence by the Coriolis effect. In the lower fan where the levees became too low to maintain a stable pathway for the turbiditic flows, channel migration occurred. Locations of HARPs and channels after bifurcation are controlled by the pre-existing bathymetry. Sedimentary deposits are confined between the high levees of unit 0 (the initial phase of the youngest channel-levee system) to the south, and the steep relief of the Dniepr Fan to the north.The HARPs of the most recent phase of avulsion are the most severely constrained by local topography and form a very narrow elongate structure that is at most half as thick as the previous HARPs. Their distal part is not covered by channel-levee systems and is visible both on sidescan mosaics and on chirp profiles and was sampled in core BLKS 98-20.Sea level controlled fan activity but the evolution of the last channel-levee system with several bifurcations during a single sea level lowstand suggests that the primary control of channel avulsion and sand delivery is probably autocyclic.The presence of important HARP sand bodies in the mud-rich Danube Fan is presumed by analogy with a similar seismic facies on the Amazon Fan and indicated by the sands cored in BLKS98-20. However, only drilling of the HARP units could verify this interpretation.
Marine Geology (0025-3227) (Elsevier), 2001-09 , Vol. 179 , N. 1-2 , P. 25-37

Droits : 2001 Elsevier Science B.V. All rights reserved
http://archimer.ifremer.fr/doc/2001/publication-474.pdf
DOI:10.1016/S0025-3227(01)00197-9
http://archimer.ifremer.fr/doc/00000/474/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Heletz sandstone (Israel) reactivity is studied by means of CO2-rich brine percolation experiments and modeling. Experiments are performed at in situ temperature and pressure conditions with two distinctly different injection flow rates and for two different brine compositions: the genuine Heletz brine and a similar brine but in equilibrium with gypsum. The Heletz sandstone is composed of quartz, dolomite, ankerite, K-feldspar, clay minerals and minor amounts of gypsum and pyrite. The main reaction is the dissolution of the carbonates which is fastest for the highest flow rate injection and for the genuine Heletz brine. Permeability increases during the five percolation experiments, regardless of flow rate and brine type. This increase in permeability is associated to a decrease in porosity during the gypsum-equilibrated brine experiments due to gypsum precipitation. The precipitation of secondary minerals (kaolinite, muscovite and smectite) is mainly controlled by the dissolution of K-feldspar and largest at low flow rate injection, indicating that these precipitation processes are diffusion-controlled and localized in immobile zones where favorable chemical micro-environments exist. These processes are quantified by means of a reactive transport model. These results indicated that the CO2 injection at the Heletz site should trigger both permeability increase in interface between brine and CO2, which may extend over a large extension and where mixing processes are very active, especially near the well under intermittent injection conditions.
ISSN: 1750-5836

hal-01356329
https://hal.archives-ouvertes.fr/hal-01356329
DOI : 10.1016/j.ijggc.2015.10.023

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : International audience
Two-dimensional simulations using a thermomechanical model based on a finite-difference method on a staggered grid and a marker in cell method are performed to study the plume-lithosphere interaction beneath moving plates. The plate and the convective mantle are modelled as a homogeneous peridotite with a Newtonian temperature- and pressure-dependent viscosity. A constant velocity, ranging from 5 to 12.5 cm yr−1, is imposed at the top of the plate. Plumes are generated by imposing a thermal anomaly of 150 to 350 K on a 50 km wide domain at the base of the model (700 km depth); the plate atop this thermal anomaly is 40 Myr old. We analyse (1) the kinematics of the plume as it impacts the moving plate, (2) the dynamics of time-dependent small-scale convection (SSC) instabilities developing in the low-viscosity layer formed by spreading of hot plume material at the base of the lithosphere and (3) the resulting thermal rejuvenation of the lithosphere. The spreading of the plume material at the base of the lithosphere, characterized by the ratio between the maximum down- and upstream horizontal (dimensionless) velocities in the plume-fed sublithospheric layer, Peup/Pedown depends on the ratio between the maximum plume upwelling velocity and the plate velocity, Peplume/Peplate. For fast plate velocities and sluggish plumes (low Peplume/Peplate), plate motion drags most plume material and downstream flow is dominant. As Peplume/Peplate increases, an increasing part of the plume material flows upstream. SSC systematically develops in the plume-fed sublithospheric layer, downstream from the plume. Onset time of SSC decreases with the Rayleigh number. For vigorous plumes, it does not depend on plate velocity. For more sluggish plumes, however, variations in the plume spreading behaviour at the base of the lithosphere result in a decrease in the onset time of SSCs with increasing plate velocity. In any case, SSC results in uplift of the isotherm 1573 K by up to 20 km relative to its initial equilibrium depth at the impact point.
ISSN: 0956-540X

hal-00856763
https://hal.archives-ouvertes.fr/hal-00856763
DOI : 10.1093/gji/ggt128

Éditeur(s) : HAL CCSD Elsevier
Résumé : The Erro-Tobbio peridotites (Voltri Massif, Ligurian Alps) represent subcontinental lithospheric mantle tectonically exhumed during Permo-Mesozoic extension of the Europe-Adria lithosphere. Previous studies have shown that exhumation started during Permian times, and occurred along kilometer-scale lithospheric shear zones which enhanced progressive deformation and recrystallization from spinel- to plagioclase-facies conditions. Ongoing field and petrologic investigations have revealed that the peridotites experienced, during uplift, a composite history of diffuse melt migration and multiple episodes of ultramafic-mafic intrusions. In this paper we present the results of field, structural and petrologic-geochemical investigations into a sector of the Erro-Tobbio peridotite unit that preserves well this multiple intrusion history. Melt impregnation in the peridotites is evidenced by significant plagioclase enrichment and crystallization of unstrained orthopyroxene replacing kinked mantle olivine and clinopyroxene; impregnating melts were thus opx-saturated. Melt-rock interaction caused chemical changes in mantle minerals (e.g. Al decrease and REE increase in cpx; Ti and Cr# enrichment in spinel). Nevertheless, clinopyroxenes still exhibit LREE depletion (Ce;N;/Sm;N; = 0.006-0.011), indicating a depleted signature for the percolating melts. Melt impregnation was thus related to diffuse porous flow migration of depleted MORB-type melt fractions that modified their compositions towards opx saturation by mantle-melt interaction during ascent. The impregnated peridotites are intruded by a hectometer-scale stratified cumulate body, mostly consisting of troctolites and plagioclase wehrlites, showing gradational, interfingered contacts with the host mantle rocks. Subsequent intrusion events are revealed by the occurrence of olivine gabbros as decameter-wide lenses, variably thick (centimeter- to meter-scale) dykes and thin dykelets, which crosscut both the peridotite foliation and the magmatic layering in the cumulates. Overall, major and trace element compositions of minerals in the intrusives indicate that they represent variably differentiated cumulus products crystallized from rather primitive N-MORB-type aggregated melts. Slightly more evolved compositions are shown by olivine gabbros, relative to the troctolites and plagioclase wehrlites of the cumulate body. Mineral chemistry features (e.g. the Fo-An correlation and high Na, Ti, Mg# in cpx) indicate that the studied intrusive rocks crystallized at moderate pressure conditions (3-5 kbar, i.e. 9-15 km depth). Our study thus points to a progressive transition from porous flow melt migration to emplacement of magmas in fractures, presumably related to progressive change of lithospheric mantle rheology during extension-related uplift and cooling.
ISSN: 0024-4937

hal-00407669
https://hal.archives-ouvertes.fr/hal-00407669
DOI : 10.1016/j.lithos.2006.06.014

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : The environment is impacted by natural and anthropogenic disturbances that occur at different spatial and temporal scales, and that lead to major changes and even disequilibria when exceeding the resiliency capacities of the ecosystem. With an annual mean flow of 1700 m(3) s(-1), the Rhone River is the largest of the western Mediterranean basin. Its annual solid discharges vary between 2 and 20 Mt, with flood events responsible for more than 70% of these amounts. In the marine coastal area, close to the mouth, both flocculation and aggregation lead to the formation of fine-grained deposits, i.e. the prodelta. This area is characterized by sediment accumulation rates up to 20-50 cm yr(-1) and high accumulations of particle reactive contaminants such as various man-made radionuclides released into the river by nuclear facilities or arising form prior atmospheric nuclear tests (1954-1980) and the Chernobyl accident (April 1986). This prodelta, however, cannot be considered as a permanent repository for particle reactive pollutants since it is subjected to reworking processes. Sediment dynamics had to be linked to the influences of hydrodynamic and atmospheric events such as high flow rates or storms close to the Rhone River mouth. An experiment was carried out during the winter 2006 based on the deployment of two ADCPs and six altimeters at the Grand Rhone mouth for several months. This type of installation has never been used before in this area because of the hard meteorological conditions and the strong fishing activities. However, results showed pluricentimetric rises of the sedimentary level just after river flood events and decreases during storms, generated by southeast winds. Radiotracers and grain size depth profiles helped to characterise the studied events and to establish inventories of sediments and radionuclides. A cruise (CARMEX) was carried out during this same period to collect water samples, suspended particles and sediment cores. The results enabled us to link both river flow and wind characteristics to events recorded on the sea floor, i.e. resuspension, accumulation, consolidation, etc. Deposits of 11 cm of sediments were estimated during flood periods and bottom shear stresses up to 5 N m(-2) were calculated during sediment erosion phases. (C) 2010 Elsevier Ltd. All rights reserved.
Continental Shelf Research (0278-4343) (Pergamon-elsevier Science Ltd), 2010-05 , Vol. 30 , N. 9 , P. 1095-1107

Droits : 2010 Elsevier B.V. All rights reserved.
http://archimer.ifremer.fr/doc/00006/11695/8479.pdf
DOI:10.1016/j.csr.2010.02.015
http://archimer.ifremer.fr/doc/00006/11695/

Éditeur(s) : HAL CCSD American Geophysical Union
Résumé : International audience
Both flow field heterogeneity and mass transfer between mobile and immobile domains have been studied separately for explaining observed anomalous transport. Here we investigate non-Fickian transport using high-resolution 3-D X-ray microtomographic images of Berea sandstone containing microporous cement with pore size below the setup resolution. Transport is computed for a set of representative elementary volumes and results from advection and diffusion in the resolved macroporosity (mobile domain) and diffusion in the microporous phase (immobile domain) where the effective diffusion coefficient is calculated from the measured local porosity using a phenomenological model that includes a porosity threshold ( inline image) below which diffusion is null and the exponent n that characterizes tortuosity-porosity power-law relationship. We show that both flow field heterogeneity and microporosity trigger anomalous transport. Breakthrough curve (BTC) tailing is positively correlated to microporosity volume and mobile-immobile interface area. The sensitivity analysis showed that the BTC tailing increases with the value of inline image, due to the increase of the diffusion path tortuosity until the volume of the microporosity becomes negligible. Furthermore, increasing the value of n leads to an increase in the standard deviation of the distribution of effective diffusion coefficients, which in turn results in an increase of the BTC tailing. Finally, we propose a continuous time random walk upscaled model where the transition time is the sum of independently distributed random variables characterized by specific distributions. It allows modeling a 1-D equivalent macroscopic transport honoring both the control of the flow field heterogeneity and the multirate mass transfer between mobile and immobile domains.
ISSN: 0043-1397

hal-01278285
https://hal.archives-ouvertes.fr/hal-01278285
DOI : 10.1002/2015WR017645

Résumé : La thèse est consacrée à la recherche des catastrophes marines (tsunamis, ondes de tempête) dans les Antilles françaises, en utilisant des modèles analytiques et numériques de mécanique des fluides. L'accent est mis sur le développement de modèles de mouvement de glissements de terrain et des vagues causées par ces glissements. Le modèle le plus simple du glissement de terrain «solide block» est utilisé pour évaluer les caractéristiques des flux pyroclastiques du volcan Soufrière-Hills (Montserrat). Un modèle plus complexe de modélisation de glissement de terrain (modèle de Savage-Hutter) a été étudié analytiquement, donnant ainsi une nouvelle famille de solutions exactes décrivant le mouvement de l'écoulement par gravité non linéaire dans une vallée ou dans un canyon sous-marin. Le modèle comprend des ondes simples (Riemann waves),le cas d'un barrage qui cède (dam-break problem), des solutions auto-similaires dans la M-fonne et « chapeaux paraboliques ». Grâce à la théorie linéaire de l'eau peu profonde nous avons étudié le processus de génération de tsunamis par des glissements de terrain de volume variable, se déplaçant à une vitesse variable dans un bassin de profondeur variable. Dans le cas d'un fond marin particulier (cas sans "réflexion"), les phénomènes de résonnance ont été étudiés dans un bassin à profondeur variable. Nous avons utilisé des méthodes numériques pour la résolution non-linéaire des équations des eaux peu profondes afin d'analyser des catastrophes marines réelles (les ondes de tempête causées par le cyclone Lili en 2002, le tsunami volcanique de 2003 à Montserrat) et probables (un tsunami prés des côtes de la Martinique). Des données sur les catastrophes
The dissertation is devoted to research in the field of marine natural hazards (tsunamis, storm surges) in the French West Indies, using analytical and numerical models of fluid mechanics. Emphasis is placed on the development of models of landslide motion and generated tsunami waves. The simple "solid block" model is used to evaluate the characteristics of pyroclastic flow Soufriere Hills volcano (Montserrat). The "fluid model" of a landslide (so called Savage-Hutter model) is studied analytically; within this model a new family of exact solutions that describe the motion of nonlinear gravity flow in a valley or underwater canyon is found: nonlinear Riemann wave, dan break problem, self-similar solutions (M - wave and parabolic cap). In the framework of the linear shallow water theory the process of generation of tsunami waves by landslides of variable volume moving with variable velocity above the basin of variable depth is studied. For the specific bottom profile ("reflectionless" one) the resonant phenomena is investigated in the basin of variable depth. Numerical methods are used to analyze marine hazards: historical (storm surges, caused by Cyclone LILI in 2002; volcanic tsunami 2003 on Montserrat) and possible events (possible tsunami of the coast of Martinique). Various data on marine natural disasters are obtained during field surveys (volcanic tsunami in 2003, stonn surges caused by Hurricane Dean in 2007). Designed catalogs of tsunamis and storm surges are created based on results of numerical modeling and field studies; some statistical analysis is perfomed

http://www.theses.fr/2011AGUY0435/document

Résumé : This report includes a qualitative and descriptive approach of the oyster and mussel industries in the European Community. This report compares the structure of production, the marketsn the professional organisation, competition for the resource, legislation and support systemat the community levell. Technical and statistical datas are summarized to représent the structure of the industry, the trade flows and the main evolutions of the two industries in the EC. A summary of the county reports gives an overview of the present state of the industry in each country and suggest a first evaluation of constraints and prospects. [NOT CONTROLLDED OCR]
Ce rapport comprend une approche descriptive et qualitative du secteur conchylicole traditionnel (moules et huîtres) dans la Communauté Européenne. Il aborde les aspects production, marché, organisation, réglementation, système d'aide dans les différents pays par une analyse comparative des secteurs, complétée par une synthèse chiffrée des données techniques et statistiques. Une vision d'ensemble des flux et de l'évolution des deux filières dans la Communauté est ainsi présentée. Un résumé des rapports nationaux évalue l'organisation, les contraintes et les perspectives du secteur dans chacun des pays. [OCR NON CONTRÔLE]

Droits : 1993 Ifremer
http://archimer.ifremer.fr/doc/1993/rapport-4176.pdf
http://archimer.ifremer.fr/doc/1993/sup-4176.pdf
http://archimer.ifremer.fr/doc/00000/4176/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This manuscript reports on a novel field experiment carried out on a microtidal beach in Camargue, France. For the first time in the field, a comprehensive description of the groundwater dynamics under sandy beach swash zone is presented. A cross-shore network of 15 buried pressure sensors is combined with terrestrial LiDAR measurements to study the swash-groundwater dynamics. The presented data focus on the decay of a moderate storm which allows to monitor the evolution of the groundwater pressure field in response to the retreat of the swash zone. Both horizontal and vertical head gradients are measured within the porous sand soil to estimate the groundwater flow field using Darcy’s law. Time-averaged analysis demonstrates the presence of a rather consistent groundwater circulation pattern under the swash zone, shifting offshore with the swash zone. The main tendency is an offshore directed flow, with infiltration/exfiltration in the upper/lower parts of the swash zone. Time-resolved analysis highlights the typical groundwater response to swash events which consists mainly of an overall infiltration flow during the bed inundation by the swash tongue, a seaward flow during the swash retreat and, for long backwash events, a localized exfiltration flow under the next incoming uprush.
ISSN: 0309-1708

hal-01412450
https://hal.archives-ouvertes.fr/hal-01412450
DOI : 10.1016/j.advwatres.2016.09.009

Éditeur(s) : Springer
Résumé : The Håkon Mosby mud volcano is a 1.5-km-diameter geological structure located on the Southwest Barents Sea slope at a water depth of 1,270 m. High-definition seabed mapping of the mud volcano has been carried out in 2003 and 2006. A comparative analysis of the bathymetry and backscatter maps produced from the two surveys shows subtle morphological changes over the entire crater of the mud volcano, interpreted to be the consequence of mud eruption events. Mud temperature measurements point to a persistently warm mud at shallow depth in the crater. This is explained by upward fluid advection, rather than conductive cooling of mud flows. The small-scale spatial variability in the temperature distribution may be related to mud outflows or changes in the fluid flow regime. Furthermore, the locations of free gas venting observed in 2006 were found to differ from those of 2003. Our observations of overall similar topographic profiles across the mud volcano in 2003 and 2006 suggest that eruption events would have been modest. Nevertheless, the data bring evidence of significant change in activity even over short time intervals of only 3 years. This may be a characteristic shared by other submarine mud volcanoes, notably those considered to be in a quiescent stage.
Geo-marine Letters (0276-0460) (Springer), 2010-06 , Vol. 30 , N. 3-4 , P. 157-167

Droits : Springer-Verlag 2010
http://archimer.ifremer.fr/doc/00004/11527/10261.pdf
DOI:10.1007/s00367-010-0193-z
http://archimer.ifremer.fr/doc/00004/11527/

Éditeur(s) : HAL CCSD Oxford University Press (OUP)
Résumé : Understanding the genetic mechanisms of speciation and basis of species differences is among the most important challenges in evolutionary biology. Two questions of particular interest are what roles divergent selection and chromosomal differentiation play in these processes. A number of recently proposed theories argue that chromosomal rearrangements can facilitate the development and maintenance of reproductive isolation and species differences by suppressing recombination within rearranged regions. Reduced recombination permits the accumulation of alleles contributing to isolation and adaptive differentiation and protects existing differences from the homogenizing effects of introgression between incipient species. Here, we examine patterns of genetic diversity and divergence in rearranged versus collinear regions in two widespread, extensively hybridizing sunflower species, Helianthus annuus and Helianthus petiolaris, using sequence data from 77 loci distributed throughout the genomes of the two species. We find weak evidence for increased genetic divergence near chromosomal break points but not within rearranged regions overall. We find no evidence for increased rates of adaptive divergence on rearranged chromosomes; in fact, collinear chromosomes show a far greater excess of fixed amino acid differences between the two species. A comparison with a third sunflower species indicates that much of the nonsynonymous divergence between H. annuus and H. petiolaris probably occurred during or soon after their formation. Our results suggest a limited role for chromosomal rearrangements in genetic divergence, but they do document substantial adaptive divergence and provide further evidence of how species integrity and genetic identity can be maintained at many loci in the face of extensive hybridization and gene flow.
ISSN: 0737-4038

hal-01032153
https://hal.archives-ouvertes.fr/hal-01032153
DOI : 10.1093/molbev/msp043