Éditeur(s) : Université de la Réunion
Résumé : The green turtle (Chelonia mydas) is an emblematic species of marine life. However, nowadays it is subject to many threats (poaching, by-catch). Even if there is deep growing measures for its protection, the green turtle still is an endangered species and it is listed in Appendix I of Washington Convention (CITES). In order to elaborate efficient conservation and management plans, perfect knowledge of green turtle biology, but also of its population structure and their characteristics, are needed. In this thesis, we have assessed genetic structure of green turtle populations in the South-Western Indian Ocean by using genetic tools. In all, 1551 tissue samples have been collected from our study zone and from our control site French Polynesia (37 samples). All kinds if individuals were sampled (except males in reproductive phase) from 15 sampling sites including nesting, foraging, and immature development site. We used both control region of mitochondrial DNA and 6 microsatellite loci to better infer maternal and paternal lineages. We identified 29 haplotypes in the South-Western Indian Ocean. They are distributed in 3 independent and highly divergent clades, including one composed with haplotypes from Atlantic Ocean. For 7 of these haplotypes, it was the first time they were detected in the study zone. Fifteen haplotypes were previously undescribed, distributed in all the 3 clades. These new haplotypes seem to be specific to the South-Western Indian Ocean, which is then an original zone. Besides, we found a high allelic richness. These results show the South-western Indian Ocean is rich and very diversified. This region plays an important role in the global diversity of the species. The South-Western Indian Ocean is one of the two contact zones presently known between the two metapopulations of green turtles (Atlantic-Mediterranean and Indo-Pacific). This contact induces a genetic cline based on CM8 (Atlantic) and C3 (Indo-Pacific) haplotype frequencies. Analysis of the microsatellite differentiation between individuals provides evidence of genetic exchanges between the two metapopulations in the region. The South-Western Indian Ocean participates to green turtle global genetic mixing. Studying the influence of several intrinsic and extrinsic factors on population structuring provides useful information for management plan elaboration. We found no significant difference between genetic structures of foraging females and males, contrary to immature turtles which seem to be organised in 'regional pools'. This organisation could be due to both immature natal homing and influence of oceanic currents. High mitochondrial differentiation of nesting females and low global microsatellite differentiation of our samples indicate male-mediated gene flow among populations of the study zone. The genetic composition of a sampling site presents no significant variation along the year, even if we could notice some trends. Nevertheless, it can be significantly different from a year to an other one. This may result from alternation of distinct populations on the same site. We noticed different evolution in 10 or 20 years of the genetic composition depending on the sampling site. Geographic distance seems not to have significant influence on population structuring concerning microsatellite markers. Nesting females of Saziley Beach (Mayotte Island, Comoros Archipelago) present genetic divergence from females nesting in the two other sampled beaches of this island. The observed population structure shows no contradiction with the organisation of oceanic currents in the South-Western Indian Ocean. Comparing the results from the two genetic markers used, we identified 8 genetic differentiated clusters of turtles in the study zone and at least 6 distinct populations. These clusters constitute 8 potential management units (MUs) which could serve as basis in the elaboration of conservation and management plans.
La tortue verte (Chelonia mydas) constitue l'un des espèces emblématiques de la vie marine, pourtant de nombreuses menaces pèsent de nos jours encore sur sa survie (braconnage, captures accidentelles). Ainsi, malgré l'essor de mesures de protection menées à travers pour sa sauvegarde, la tortue verte constitue une espèce 'en danger d'extinction' et figure dans l'Annexe I de la Convention de Washington (CITES). Afin d'élaborer des plans de gestion et de conservation qui soient efficaces, il est important d'avoir une parfaite connaissance de la biologie de la tortue verte, mais aussi de la structure de ses populations et de leurs caractéristiques. C'est dans ce cadre que s'inscrit la présente étude. L'objectif de cette étude était d'acquérir des connaissances sur la structure des populations de tortues vertes dans le sud-ouest de l'océan Indien grâce à l'utilisation de l'outil génétique. Au total, 1551 échantillons de tissu ont été collectés dans la zone d'étude et dans notre site témoin la Polynésie française (37 échantillons). Toutes les catégories d'individus ont été échantillonnées (excepté les mâles en phase de reproduction) et les 15 sites d'échantillonnage comprennent à la fois des sites de ponte, d'alimentation et de développement pour les immatures. Deux types de marqueurs ont été utilisés : la région contrôle de l'ADN mitochondrial et 6 loci microsatellites, afin d'appréhender au mieux l'apport des lignées maternelles et paternelles. Nous avons pu mettre en évidence la présence dans le sud-ouest de l'océan Indien de 29 haplotypes distincts, appartenant à trois clades fortement divergents dont l'un constitué d'haplotypes originaires de l'océan Atlantique. Parmi ces haplotypes, 7 ont été détectés pour la première fois dans la zone d'étude, et 15 autres n'ont jamais été précédemment décrits chez cette espèce. Ils sont présents dans chacun des 3 clades d'haplotypes. Ces nouveaux haplotypes semblent spécifiques à la région, et en font une zone originale. On observe par ailleurs une grande richesse allélique dans les effectifs analysés. Ces résultats montrent que le sud-ouest de l'océan Indien est une zone riche et très diversifiée. Cette région joue un rôle important dans la diversité génétique globale de l'espèce. Le sud-ouest de l'océan Indien constitue l'une des deux seules zones connues à l'heure actuelle de contact entre les deux métapopulations de tortues vertes (Atlantique-Méditerranée et Indo-Pacifique). Ce contact a entraîné la formation d'un cline génétique portant principalement sur les fréquences relatives des haplotypes CM8 (Atlantique) et C3 (Indo-Pacifique). Les résultats obtenus lors de l'analyse microsatellite de la différenciation entre les individus originaires des deux métapopulations montrent que le sud-ouest de l'océan Indien constitue une zone d'échanges génétiques entre les deux métapopulations, participant au brasage génétique de l'espèce. L'étude de facteurs, intrinsèques et extrinsèques, pouvant influencer la structuration des populations apportent de nombreuses informations qui pourraient s'avérer utiles lors de l'élaboration de plans de gestion. La structure des femelles et des mâles en alimentation ne diffère pas, contrairement à celle des immatures qui semble s'organiser en 'pools régionaux' qui seraient le fruit de l'interaction d'un comportement de philopatrie et d'une influence des courants océaniques. La forte différenciation mitochondriale des femelles en ponte et la très faible différenciation microsatellite observée à l'échelle de la région, indiquent l'existence de flux de gènes via les mâles. La composition génétique d'un site ne varie pas de manière significative au cours de l'année. Par contre, elle peut varier d'une année à l'autre, signifiant l'alternance dans certains sites de ponte de plusieurs populations distinctes. L'évolution de la composition génétique d'un groupe, au cours de 10 ou 20 ans, diffère selon le site considéré. La distance ne semble pas influencer de manière significative la structuration des populations au niveau microsatellite. Les femelles en ponte sur la plage de Saziley (Mayotte) diffèrent génétiquement de celles pondant sur les deux autres plages de l'île. La structure observée des populations est en accord avec l'organisation des courants océanique dans la région. La confrontation des résultats obtenus à partir des deux marqueurs génétiques utilisés, permet la détermination de 8 ensembles génétiquement différenciés dans la zone d'étude et l'identification d'au moins 6 populations distinctes. Ces ensembles constituent autant d'unités de gestion (MUs) potentielles qui pourront servir de base à l'élaboration de plans de gestion et de conservation.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2007/these-3532.pdf
http://archimer.ifremer.fr/doc/00000/3532/

Éditeur(s) : HAL CCSD Société géologique de France
Résumé : U-Pb ages obtained from detrital zircon from terrigenous sediments are used to determine the sources. Present fluvial sand-bars of the Ogooue river yield age spectra of detrital zircons in agreement with Archean and Early Proterozoic Sources found in the drainage. The large proportion of Late Proterozoic zircons cannot be derived from primary erosion of the watershed basement rocks, since there is no formation of that age in the area. This later group of zircons is in good agreement with reworking of the aeolian Paleogene Bateke Sands, by regressive erosion in the upper reaches of the Ogooue river, as they contain a majority of Late Proterozoic age zircons. The sources of Late Proterozoic zircons in the Bateke Sand are very distant, and transported and reworked - at least in part - by aeolian processes. Our results, together with the widely distributed Paleogene sediments over continental Africa, suggests that Paleogene was it time of subdued erosion of the cratonic areas and extensive reworking, transport and deposition within continental Africa. In contrast, our results from the Ogooue river indicate active present incision of the cratonic area, erosion of the previous continental sediments, and export of the river bed-load to the continental margin. This temporal evolution of erosion-transport-deposition is correlated with the drastic climate change that occurred during the Cenozoic, leading to a more efficient mechanical erosion, and it correlates with the increase of terrigenous flux to the margin, observed during the Neogene.
EISSN: 1777-5817

hal-00411165
https://hal.archives-ouvertes.fr/hal-00411165
DOI : 10.2113/gssgfbull.179.1.29

Éditeur(s) : HAL CCSD
Résumé : National audience
Designing systems able to interact with students in a natural manner is a complex and far from solved problem. A key aspect of natural interaction is the ability to understand and appropriately respond to human emotions. This paper details our response to the continuous Audio/Visual Emotion Challenge (AVEC'12) whose goal is to predict four affective signals describing human emotions. The proposed method uses Fourier spectra to extract multi-scale dynamic descriptions of signals characterizing face appearance, head movements and voice. We perform a kernel regression with very few representative samples selected via a supervised weighted-distance-based clustering, that leads to a high generalization power. We also propose a particularly fast regressor-level fusion framework to merge systems based on different modalities. Experiments have proven the efficiency of each key point of the proposed method and our results on challenge data were the highest among 10 international research teams.
IHM'14, 26e conférence francophone sur l'Interaction Homme-Machine
Lille, France

hal-01089628
https://hal.archives-ouvertes.fr/hal-01089628
https://hal.archives-ouvertes.fr/hal-01089628/document
https://hal.archives-ouvertes.fr/hal-01089628/file/p44-nicole.pdf

Éditeur(s) : American Geophysical Union
Résumé : Microwave Sea Surface Salinity (SSS) measurements can be performed by isolating the emissivity response to salinity changes from numerous geophysical effects, including surface temperature and wind waves. At L-band frequencies (1 to 2 GHz), the sensitivity to SSS is sufficient but it falls off quickly as frequency is increased. Nevertheless, methods using higher microwave frequencies with much lower SSS sensitivity than at L band, can already be tested. In particular, combining 6 and 10 GHz data in vertical polarization efficiently minimizes sea surface roughness and thermal impacts. Using AMSR-E data, the retrieved bi-monthly maps of SSS at 0.5 degrees resolution over the region of the Amazon plume show relative accuracy in-line with the future L-band dedicated mission objectives. Citation: Reul, N., S. Saux-Picart, B. Chapron, D. Vandemark, J. Tournadre, and J. Salisbury (2009), Demonstration of ocean surface salinity microwave measurements from space using AMSR-E data over the Amazon plume, Geophys. Res. Lett., 36, L13607, doi:10.1029/2009GL038860.
Geophysical Research Letters ( GRL ) (0094-8276) (American Geophysical Union), 2009-07 , Vol. 36 , P. 1-5

Droits : 2009. American Geophysical Union. All Rights Reserved
http://archimer.ifremer.fr/doc/2009/publication-6620.pdf
DOI:10.1029/2009GL038860
http://archimer.ifremer.fr/doc/00000/6620/

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
This paper aims to present an overview on the influence of rheological heterogeneity and mechanical anisotropy on the deformation of continents. After briefly recapping the concept of rheological stratification of the lithosphere, we discuss two specific issues: (1) as supported by a growing body of geophysical and geological observations, crust=mantle mechanical coupling is usually efficient, especially beneath major transcurrent faults which probably crosscut the lithosphere and root within the sublithospheric mantle; and (2) in most geodynamic environments, mechanical properties of the mantle govern the tectonic behaviour of the lithosphere. Lateral rheological heterogeneity of the continental lithosphere may result from various sources, with variations in geothermal gradient being the principal one. The oldest domains of continents, the cratonic nuclei, are characterized by a relatively cold, thick, and consequently stiff lithosphere. On the other hand, rifting may also modify the thermal structure of the lithosphere. Depending on the relative stretching of the crust and upper mantle, a stiff or a weak heterogeneity may develop. Observations from rift domains suggest that rifting usually results in a larger thinning of the lithospheric mantle than of the crust, and therefore tends to generate a weak heterogeneity. Numerical models show that during continental collision, the presence of both stiff and weak rheological heterogeneities significantly influences the large-scale deformation of the continental lithosphere. They especially favour the development of lithospheric-scale strike-slip faults, which allow strain to be transferred between the heterogeneities. An heterogeneous strain partition occurs: cratons largely escape deformation, and strain tends to localize within or at the boundary of the rift basins provided compressional deformation starts before the thermal heterogeneity induced by rifting are compensated. Seismic and electrical conductivity anisotropies consistently point towards the existence of a coherent fabric in the lithospheric mantle beneath continental domains. Analysis of naturally deformed peridotites, experimental deformations and numerical simulations suggest that this fabric is developed during orogenic events and subsequently frozen in the lithospheric mantle. Because the mechanical properties of single-crystal olivine are anisotropic, i.e. dependent on the orientation of the applied forces relative to the dominant slip systems, a pervasive fabric frozen in the mantle may induce a significant mechanical anisotropy of the whole lithospheric mantle. It is suggested that this mechanical anisotropy is the source of the so-called tectonic inheritance, i.e. the systematic reactivation of ancient tectonic directions; it may especially explain preferential rift propagation and continental break-up along pre-existing orogenic belts. Thus, the deformation of continents during orogenic events results from a trade-off between tectonic forces applied at plate boundaries, plate geometry, and the intrinsic properties (rheological heterogeneity and mechanical anisotropy) of the continental plates.
ISSN: 0040-1951

hal-01389719
http://hal.univ-reunion.fr/hal-01389719
http://hal.univ-reunion.fr/hal-01389719/document
http://hal.univ-reunion.fr/hal-01389719/file/vauchez_etal_rheology_1998_hal.pdf
DOI : 10.1016/S0040-1951(98)00137-1

Éditeur(s) : HAL CCSD Wiley
Résumé : Revue de rang A
International audience
This paper studies how to detect anomalies in a distributed manner by using wireless sensor networks (WSNs). We focus on a medical context, where the existing works generally provide large environments to monitor patients using sensors as simple transducers. Those devices forward sensed health parameters to a main base station. This station collects received data and may perform some computations. In this paper, we perform some distributed tasks on the sensors. We propose a distributed algorithm, which allows to raise alarms under some initial rules to alert efficiently medical staff in case of critical situations without needless warnings. Each mote monitors a parameter. When this parameter reaches an abnormal value, the mote communicates with other motes in order to check if it is a ‘local' anomaly or if the patient is in an abnormal situation. In such cases an alarm is raised. We implemented our algorithm over a network of micaZ sensors running under TinyOS. The obtained results show promising perspectives.
ISSN: 1532-0626

hal-00519594
https://hal.archives-ouvertes.fr/hal-00519594
DOI : 10.1002/cpe.1583

Éditeur(s) : HAL CCSD
Résumé : Among erosion processes, river incision is classicaly described as a key process controlling erosion of landscapes. Incision efficiency is mainly influenced by climate and erodibility. This latter is not only dependent on the nature of the bedrock, but also on its past deformation, which affects its rheological effective properties, such as fracture density. The main objectives of this thesis are: (1) to better constrain the relationship between effective properties and erodibility, and (2) to quantify the influence of erodibility and erosion on both the temporal and spatial building or decay of the topography. Several numerical tools are developed. A 1D formalism of landscape evolution is introduced, including river incision with stochastic distribution of water discharge and hillslope landsliding. A new remeshing algorithm called Surface Lagrangian Remeshing (SLR) is developed as a complement to remeshing algorithms dealing with internal elements. It allows one to take into account long-term erosion into 2D Lagrangian numerical codes based on triangular finite elements. Then the potentiality of measuring erodibility in-situ using a Schmidt hammer (R) is assessed for the active orogen of Taiwan, the diagenetic Annot sandstones and St Clement fault zone. Results suggest a strong control of R by effective properties. A linear model based on effective medium theory is applied to a fault zone with an unmacthed resolution (750 measures, 25 measures per square meter). The model successfully correlates R to fracture density. These results demonstrate that effective elasticity as well as erodibility are sensitive to the density and type of fractures. Finally I focus on the erosional and rheological conditions that allows reproducing post-orogenic evolution of mountain belts. A model coupling surface erosion and regional isostatic uplift is consistent with observations. The topographic decay and decrease of the ratio of surface elevation over crustal root thickness is at first order controlled by the initial geometry of the mountain belt and erosion efficiency. This new model highlights the control ofclimate and erodibility on the topographic decay and of lithospheric rheology on the perseverance of crustal roots.
Parmi les processus d'érosion, l'incision des rivières est classiquement décrit comme un processus clé contrôlant l'érosion des paysages. L'efficacité de l'incision est principalement influencée par le climat et par l'érodabilité. Ce dernier paramètre ne dépend pas seulement de la nature du substratum rocheux, mais aussi de sa déformation passée qui affecte ses propriétés rhéologiques équivalentes. Les principaux objectifs de cette thèse sont: (1) de mieux contraindre les relations entre propriétés équivalentes et érodabilité, et (2) de quantifier l'influence de l'érosion et de l'érodabilité sur la formation ou la décadence, spatiale et temporelle, de la topographie. Plusieurs outils numériques sont développés. Un formalisme 1D d'évolution des paysages est proposé, prenant en compte simultanément l'incision des rivières avec une distribution stochastique des débits en eau et l'érosion des versants par glissements de terrain. Un nouvel algorithme de remaillage appelé Surface Lagrangian Remeshing (SLR) est développé. Il permet de prendre en compte l'érosion à long terme dans les codes numériques 2D Lagrangiens basés sur des éléments finis triangulaires. Ensuite, la possibilité de mesurer in-situ l'érodabilité avec un marteau de Schmidt (R) est évaluée pour: l'orogène actif de Taiwan, les grès diagénétiques d'Annot et la zone de faille de St Clément. Les résultats suggèrent un fort contrôle de R par les propriétés équivalentes des roches testées. Un modèle linéaire, basé sur la théorie des milieux équivalents, est appliqué à une zone de faille avec une résolution inégalée (750 mesures, 25 mesures par mètre carré). Le modèle permet de corréler avec succès la densité de fracture et R. Ces résultats démontrent empiriquement que l'élasticité équivalente ainsi que l'érodabilité sont sensibles à la densité et à la nature des fractures. Enfin j'étudie les conditions d'érosion et de rhéologie qui permettent de reproduire l'évolution des chaînes de montagnes post-orogéniques. Un modèle couplant érosion en surface et soulèvement isostatique régional est compatible avec les observations. Les taux de décroissance topographique et de diminution du rapport de l'élévation de surface sur l'épaisseur de racine crustale sont contrôlés au premier ordre par la géométrie initiale de la chaîne de montagne et par l'efficacité de l'érosion. Ce nouveau modèle met en évidence le contrôle du climat et de l'érodabilité sur la décroissance topographique et de la rhéologie lithosphérique sur la persévérance des racines crustales.
https://tel.archives-ouvertes.fr/tel-00602341

tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341/document
https://tel.archives-ouvertes.fr/tel-00602341/file/thesephilippesteer.pdf

Éditeur(s) : HAL CCSD Springer Verlag
Résumé : International audience
Banana has been a main agricultural product in the French West Indies (Guadeloupe and Martinique) since the 1960s. This crop requires the intensive use of pesticides to prevent attacks by insect pests. Chlorinated pesticides, such as hexachlorocyclohexane (HCH), chlordecone and dieldrin, were used until the beginning of the 1990s, resulting in a generalized diffuse contamination of the soil and water in the areas of banana production, hence the need to develop solutions for cleanup of the polluted sites. The aims of this work were (i) to assess lindane degradation in soil slurry microcosms treated with lindane at 10 mg/L and (ii) to detect the catabolic genes involved in the HCH degradation pathway. The soil slurry microcosm system showed a 40 % lindane degradation efficiency at the end of a 30-day experiment. Lower lindane removal was also detected in the abiotic controls, probably caused by pesticide adsorption to soil particles. Indeed, the lindane concentration decreased from 6000 to 1330 ng/mL and from 800 to 340 ng/mL for the biotic and abiotic soils, respectively. Nevertheless, some of the genes involved in the HCH degradation pathway were amplified by polymerase chain reaction (PCR) from crude deoxyribonucleic acid (DNA) extracted from the Guadeloupe agricultural soil, suggesting that HCH degradation is probably mediated by bacteria closely related to the family Sphingomonadaceae.
ISSN: 0944-1344

hal-01545905
https://hal.archives-ouvertes.fr/hal-01545905
DOI : 10.1007/s11356-015-5875-7

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The Betic-Rif orocline surrounding the Alboran Sea, the westernmost tip of the Mediterranean Sea, accommodates the NW–SE convergence between the Nubia and Eurasia plates. Recent GPS observations indicate a ∼4 mm/yr SW motion of the Rif Mountains, relative to stable Nubia, incompatible with a simple two-plate model. New gravity data acquired in this study define a pronounced negative Bouguer anomaly south of the Rif, interpreted as a ∼40 km-thick crust in a state of non-isostatic equilibrium. We study the correlation between these present-day kinematic and geodynamic processes using a finite-element code to model in 2-D the first-order behavior of a lithosphere affected by a downward normal traction (representing the pull of a high-density body in the upper mantle). We show that intermediate viscosities for the lower crust and uppermost mantle (View the MathML source1021–1022Pas) allow an efficient coupling between the mantle and the base of the brittle crust, thus enabling (1) the conversion of vertical movement, resulting from the downward traction, to horizontal movement and (2) shortening in the brittle upper crust. Our results show that incipient delamination of the Nubian continental lithosphere, linked to slab pull, can explain the present-day abnormal tectonics, contribute to the gravity anomaly observed in northern Morocco, and give insight into recent tectonics in the Western Mediterranean region.
ISSN: 0012-821X

hal-01467130
https://hal.archives-ouvertes.fr/hal-01467130
DOI : 10.1016/j.epsl.2016.08.041

Résumé : (i) La pertinence du thème est attestée par la richesse de la littérature internationale qui lui est consacrée. 11 convient au demeurant de noter la présence de publications de l'IFREMER dans ce même domaine. Les principaux acquis procèdent généralement d'approches descriptives, permettant de disposer à ce jour d'un inventaire quasi exhaustif des différents outils de gestion classiquement mis en oeuvre. D'ores et déjà il apparaît que la question de la transférabilité de mesures de gestion (e.g QIT, Licence, PME...) soulève plusieurs interrogations: cohérence juridique, acceptabilité, contrôle, coûts, efficience... Mais surtout, poser l'étude de la régulation en termes d'analyse du comportement d'un système élargit le champ des investigations au delà du domaine habituel de l'halieutique. C'est cette complexification de la problématique qui a principalement nourri la réflexion du groupe. (ii) En plus des travaux scientifiques produits sous ce thème, l'IFREMER, du fait de ses missions, se doit de répondre aux diverses sollicitations d'avis et d'expertise; pour ce qui concerne les ressources halieutiques cette charge incombe au Département RH. En outre, celui-ci a été amené à assurer un ensemble de tâches récursives (échantillonnage, statistiques de pêche et autres collectes de données) fortement consommatrices de temps, de moyens et contraignant à la dispersion géographique. Enfin, en tant qu'acteur du système de gestion, l'IFREMER s'est trouvé soumis à une certaine réserve quant à l'évaluation du système lui même, y compris son éventuelle remise en cause, ainsi qu'à des clauses limitatives pour l'exploitation et la valorisation des données. Aujourd'hui, près de 80 % de l'activité du Département sont dévolus à la réalisation d'études destinées à fournir des avis en réponse aux demandes émanant par exemple du CIEM, du CSTP, des COREMODE, des divers Comités Professionnels, des Etats Régionaux de la Ressource, et à s'impliquer dans des dossiers tels que les SMVM, le système de gestion en Méditerranée, les POP, les Plans Sectoriels, les conflits d'espace spécifiques (extraction de granulats, aquaculture) (1). La nature et la diversité de ces questions reflètent: -le statut d'interlocuteur privilégié de l'IFREMER; -la complexification des interactions pour l'accès ou l'usage des ressources marines; -la position centrale du thème de la régulation. [OCR NON CONTRÔLE]

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1992/rapport-4235.pdf
http://archimer.ifremer.fr/doc/00000/4235/

Résumé : Different seabass (Dicentrarchus labrax) intensiv rearing technics have been experimented in the pilot scale unit of our laboratory. During these upscalfing operation, the results obtained allow us to compare costs related to each fingemng production method. Closed system combined with early weaning with an efficient micropellet saves at least 69 % of direct production costs by comparison with an open system with Arternia during larval phase. However if closed systems are commonly used by private hatcheries, larval micropellets are always at experimental step.
Cet article fait le point sue les coûts de production directs relatifs à différentes méthodes d'élevage intensif du loup (Dicentrarchus labrax). Il s'appuie sur des résultats zootechniques obtenus dans l'unité de démonstration à grande échelle de notre laboratoire. Par rapport à un système de production en circuit ouvert, le recyclage de l'eau permet de diviser par 2.2 les charges directes de production. Si les proies vivantes sont précédemment remplacées par une microparticule efficace, ces charges sont alors divisées par 3.2. Les techniques de recyclage de l'eau ont franchi les portes du laboratoire pour être couramment utilisées par les professionnels, alors que les aliments articifiels convenant au stade larvaire sont toujours au stade expérimental.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1993/rapport-1916.pdf
http://archimer.ifremer.fr/doc/00000/1916/

Éditeur(s) : HAL CCSD Wiley
Résumé : Seasonal variations in environmental conditions influence the functioning of the whole ecosystem of tropical rain forests, but as yet little is known about how such variations directly influence the leaf gas exchange and transpiration of individual canopy tree species. We examined the influence of seasonal variations in relative extractable water in the upper soil layers on predawn leaf water potential, saturated net photosynthesis, leaf dark respiration, stomatal conductance, and tree transpiration of 13 tropical rain forest canopy trees (eight species) over 2yr in French Guiana. The canopies were accessed by climbing ropes attached to the trees and to a tower. Our results indicate that a small proportion of the studied trees were unaffected by soil water depletion during seasonal dry periods, probably thanks to efficient deep root systems. The trees showing decreased tree water status (i.e., predawn leaf water potential) displayed a wide range of leaf gas exchange responses. Some trees strongly regulated photosynthesis and transpiration when relative extractable water decreased drastically. In contrast, other trees showed little variation, thus indicating good adaptation to soil drought conditions. These results have important applications to modeling approaches: indeed, precise evaluation and grouping of these response patterns are required before any tree-based functional models can efficiently describe the response of tropical rain forest ecosystems to future changes in environmental conditions.
ISSN: 0006-3606

hal-01032411
https://hal.archives-ouvertes.fr/hal-01032411
DOI : 10.1111/j.1744-7429.2012.00902.x

Éditeur(s) : HAL CCSD
Résumé : International audience
We focus on some French BTS (Brevet de Technicien Supérieur / Advanced Technician Certificate), namely tourism and assistant manager, which are two important diplomas for the local development and in which microeconomic and management sciences plays a great part. The French BTS is a short Vocational Diploma prepared in two years after the “baccalauréat”, with national programs and evaluation criteria.The successful candidates are supposed to be immediately employable, especially in their local geographical environment. Thus, there exists a paradox between the national definition of the diploma and the local contexts of teaching and (supposed) professional integration. However, the professional traineeship plays a great part in this diploma. For this reason, it seems interesting to investigate how the conception of students evolve, with respect to the aforementioned paradox, during and after professional traineeship. For this purpose, questionnaire surveys have been carried out at various moment of the scholar during two years (two cohorts).The main results can be summarized as follows. The professional traineeship is positively perceived by the students at the beginning of the training. They consider it as very important for the development of professional skills. Over time, this positive representation progresses homogeneously. The students are convinced ofthe efficiency of professional traineeship: their professional project strengthened but, they also realize that their professional future will not necessarily be in Guadeloupe. This is probably linked with a better representation of the economic situation of Guadeloupe and shows, as excepted, that the context of the professional traineeship modifies the representation of students. For the BTS assistant manager, we specially note a degradation of the representation of the profession of assistant manager, whereas this training’s choice was realized with conviction.
20th GENERAL ASSEMBLY AND BIENNAL MEETING “ Biodiversity, Energy, Risks and Health from scientific knowledge to the emergence of innovative development strategies in the Caribbean”
Deshaies, Guadeloupe

hal-01535042
https://hal.univ-antilles.fr/hal-01535042

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
The discerning behavior of living systems relies on accurate interactions selected from the lot of molecular collisions occurring in the cell. To ensure the reliability of interactions, binding partners are classically envisioned as finely preadapted molecules, selected on the basis of their affinity in one-step associations. But the counterselection of inappropriate interactions can in fact be much more efficiently obtained through difficult multi-step adjustment, whose final high energy state is locked by a fluctuation ratchet. The progressive addition of molecular bonds during stereo-adjustment can be modeled as a predominantly backward random walk whose first arrival is frozen by a micro-irreversible transition. A new criterion of ligand specificity is presented, that is based on the ratio rejection/incorporation. In addition to its role in the selectivity of interactions, this generic recipe can underlie other important biological phenomena such as the regular synthesis at low level of supramolecular complexes, monostable kinetic bimodality, substrate concentration thresholds or the preparation of rapidly depolymerizable structures with stored energy, like microtubules
ISSN: 0079-6107

hal-01274234
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01274234
DOI : 10.1016/j.pbiomolbio.2016.02.001
PUBMED : 26867859

Éditeur(s) : HAL CCSD
Résumé : International audience
Despite their dynamic nature, certain chromatin marks must be maintained over the long term. This is particulary true for histone 3 lysine 9 (H3K9) trimethylation, that is involved in the maintenance of healthy differentiated cellular states by preventing inappropriate gene expression, and has been recently identified as the most efficient barrier to cellular reprogramming in nuclear transfer experiments. We propose that the capacity of the enzymes SUV39H1/2 to rebind to a minor fraction of their products, either directly or via HP1α/β, contributes to the solidity of this mark through (i) a positive feedback involved in its establishment by the mutual enforcement of H3K9me3 and SUV39H1/2 and then (ii) a negative feedback sufficient to strongly stabilize H3K9me3 heterochromatin in post-mitotic cells by generating local enzyme concentrations capable of counteracting transient bursts of demethylation. This model does not require direct molecular interactions with adjacent nucleosomes and is favoured by a series of additional mechanisms including (i) the protection of chromatin-bound SUV39H1/2 from the turnovers of soluble proteins, which can explain the uncoupling between the cellular contents in SUV39H1 mRNA and protein; (ii) the cooperative dependence on the local density of the H3K9me3 of HP1α/β-dependent heterochomatin condensation and, dispensably (iii) restricted enzyme exchanges with chromocenters confining the reactive bursts of SUV39H1/2 in heterochromatin. This mechanism illustrates how seemingly static epigenetic states can be firmly maintained by dynamic and reversible modifications. © 2016 Elsevier B.V.
Biochimica et Biophysica Acta - Gene Regulatory Mechanisms

hal-01467548
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01467548
DOI : 10.1016/j.bbagrm.2016.11.006
PUBMED : 27876670

Éditeur(s) : HAL CCSD Editions Paralia CFL
Résumé : SUBDUNE v0.6 is a very preliminary version of an exploratory model designed tocompute the sea level to the shoreline, combining the effects of various physics, from run-up to tides. It aims at providing an easy-to-use and quick way to estimate water elevation to the beach, assuming morphology is known. Combined with accurate beachdata, such as LIDAR, this engineering tool may provide with end-users an efficient way to quantify submersion.
ISSN: 1760-8716

hal-00854170
https://hal.archives-ouvertes.fr/hal-00854170
DOI : 10.5150/jngcgc.2012.022-B

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Le débat théorique sur les migrations et la famille connait une ambivalence allant du postulat de la migration comme une logique « individualiste » et de distanciation de la famille à celui de la migration vue comme une stratégie de survie portée par le réseau familial. C’est dans le but de contribuer à ce débat que le présent texte aborde l’analyse du processus migratoire sous l’angle des stratégies déployées par les migrants « Hloua » de la côte béninoise. Quatre dimensions ont particulièrement retenu notre attention : la prise de décision, le financement et l’organisation du voyage, l'intégration dans le milieu d’accueil, et les rapports maintenus avec le milieu d'origine.L’analyse s’appuie sur les récits de migration collectés auprès de migrants de retour ou de membres de familles restés au village, ceci dans le cadre d’une enquête plus large sur la pauvreté et les stratégies de survie dans le milieu de la pêche artisanale (Avloh, Ayiguinnou et Agoué) au Bénin. Cette analyse de récit a été complétée par des analyses de type quantitatif sur la fréquence des recours pour l’organisation et la prise de décision, la fréquence de recours pour l’insertion résidentielle et professionnelle, et le montant des envois de fonds. Les résultats montrent la place centrale du réseau familial le long du processus migratoire depuis la prise de décision, l’organisation du voyage, le « confiage » de la femme et des enfants du migrant, à l’établissement résidentiel et l’insertion professionnelle dans le milieu d’accueil. Ce réseau organise et structure efficacement le phénomène migratoire en intervenant lors des étapes décisives. Cependant, une fois insérés, les rapports maintenus avec le réseau familial se limitent pour la plupart à une solidarité affective, caractérisée par des contacts téléphoniques ou transferts de message et quelques envois de fonds largement en deçà des attentes. Ce qui fait dire de plus en plus que le migrant diminue le capital social de la famille sans pour autant y contribuer de façon substantielle sur le plan financier : Un paradoxe qui pourrait bien trouver son explication dans les recherches futures sous une perspective dynamique des migrations.
The theoretical debate on migration and family is ambivalent. Migration can be seen from an “individualist’’ and distant logic of the family or, on the other hand, migration can be viewed as a strategy of survival for the family network. It is in the objective of contributing to this debate, the present article will analyze the migration process from a migrant strategy perspective, more specifically from the perspective of the “Hloua” migrants off the Benin coast. Four dimensions are of particular interest: the decision making process, the cost and organization of the trip, integration in the host community and the maintenance of relations with the host community. Within a large scale research on poverty and the strategies of survival of artisan fishing (Avloh, Ayiguinnou et Agoué) in Bénin, the present analysis is based on migration stories collected from returning migrants or from family members still living in the village. This story analysis has been completed with quantitative analyses on the frequency of the use of organization and decision making, the frequency of the use of residential and professional insertion, and the amount of remittances. The results show the central place of family ties during the migratory process from the start of the decision making process, the travel planning, the entrusting of the women and children of the migrant, to the residential establishment and the professional insertion in the host society. This network organizes and structures efficiently the migratory phenomenon by intervening during the decisive steps. However, once inserted, the connections maintained with the family network are limited for the majority to an affective solidarity characterized by telephone contacts or message transfers, and sometimes remittances sent back largely lower to the family’s expectations. This results more and more in the migrant diminishing the social capital of the family without always contributing in some substantially way on the financial side. A paradox which could find its explanation in future researches under a perspective of migrations’ dynamics.
Bénin

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.5785
http://journals.openedition.org/etudescaribeennes/5785

Éditeur(s) : HAL CCSD American Chemical Society
Résumé : International audience
Constitutive activation of the PI3K/mTOR signaling pathway contributes to carcinogenesis and metastasis in most, if not all, breast cancers. From a chromene backbone reported to inhibit class I PI3K catalytic subunits, several rounds of chemical syntheses led to the generation of a new collection of chromologues that showed enhanced ability to kill PI3K-addicted cancer cells and to inhibit Akt phosphorylation at serine 473, a hallmark of PI3K/mTOR activation. This initial screen uncovered a chromene designated DHM25 that exerted potent antitumor activity against breast tumor cell lines. Strikingly, DHM25 was shown to be a selective and covalent inhibitor of mTOR using biochemical and cellular analyses, modeling, and a large panel of kinase activity assays spanning the human kinome (243 kinases). Finally, in vivo, this novel drug was an efficient inhibitor of growth and metastasis of triple-negative breast cancer cells, paving the way for its clinical application in oncology
ISSN: 0022-2623

hal-01187307
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01187307
DOI : 10.1021/acs.jmedchem.5b00991
PUBMED : 26237138

Éditeur(s) : HAL CCSD Université des Antilles
Résumé : International audience
The power of attraction of the islands is well established, between the power of intangible resources fed by representations built over time and specific natural and cultural resources of these territories borders. Tourism then appears as an undeniable opportunity. However, the singular territorial context that the island must be considered to weigh the issues of tourism development and opening to the world. In this context it is necessary to develop efficient indicators to measure the sustainability of the tourism project as well as the development of the tourism sector which is only one step (and not an end in itself) in the opening process the island.
Le pouvoir d’attraction des îles n’est plus à démontrer, entre la puissance des ressources intangibles nourries par des représentations construites au fil du temps et les ressources naturelles et culturelles spécifiques de ces territoires de confins. Le tourisme apparait alors comme une opportunité indéniable. Néanmoins le contexte territorial singulier qui fait l’île doit être pris en considération pour bien mesurer les enjeux du développement touristique et l’ouverture sur le monde. Dans ce contexte, il convient de se doter d’indicateurs efficients pour mesurer la soutenabilité du projet touristique sans oublier que le développement du secteur touristique n’est qu’une étape (et non une fin en soi) dans le processus d’ouverture de l’île.
ISSN: 1779-0980

hal-00987544
https://hal-univ-corse.archives-ouvertes.fr/hal-00987544

Éditeur(s) : HAL CCSD American Society for Biochemistry and Molecular Biology
Résumé : International audience
The budding yeast Saccharomyces cerevisiae is a major model organism for important biological processes such as mitotic growth and meiotic development, it can be a human pathogen, and it is widely used in the food-, and biotechnology industries. Consequently, the genomes of numerous strains have been sequenced and a very large amount of RNA profiling data is available. Moreover, it has recently become possible to quantitatively analyze the entire yeast proteome; however, efficient and cost-effective high-throughput protein profiling remains a challenge. We report here a new approach to direct and label-free large-scale yeast protein identification using a tandem buffer system for protein extraction, two-step protein prefractionation and enzymatic digestion, and detection of peptides by iterative mass spectrometry. Our profiling study of diploid cells undergoing rapid mitotic growth identified 86% of the known proteins and its output was found to be widely concordant with genome-wide mRNA concentrations and DNA variations between yeast strains. This paves the way for comprehensive and straightforward yeast proteome profiling across a wide variety of experimental conditions.
ISSN: 1535-9476

hal-00682837
https://hal.archives-ouvertes.fr/hal-00682837
DOI : 10.1074/mcp.M111.012682
PUBMED : 21997732