Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
French Guiana is a South American French territory, where HIV prevalence consistently exceeds 1% in the adult population. In the only correctional facility, HIV prevalence fluctuates at around 4%.
After describing the population of HIV-positive inmates, we aimed to evaluate mortality after release from the correctional facility, and to identify its predictive factors.
Outside North American settings, data on treatment outcome and vital status of HIV-positive former inmates are scarce. There were no data in French Guiana. Filling this gap represents a basis for potential improvements.
All HIV-infected adults released from an incarceration of 30 days or more, between 2007 and 2013, were enrolled in a retrospective cohort study. Mortality was described over time, one to seven years following release, using Kaplan-Meier estimates. Factors associated with mortality were identified through a non-parametric survival regression model.
147 former inmates were included. The male to female ratio was 4.4. The median age was 37.3 years. The majority were migrants, 25.8% were homeless, 70.1% suffered from substance abuse, with 34.0% of crack-cocaine users. On admission, 78.1% had an early HIV-stage infection (CDC-stage A), with a median CD4 count of 397.5/mm3, 34.0% had one comorbidity, mainly hypertension. Upon release, 50.3% were on ART. Reasons for not being treated were not fulfilling the criteria for 74.6%, and refusing for 15.1%. Before release, 84.5% of the patients on ART had a viral load≤200cp/ml. After release, 8.2% of the cohort had died, with a crude incidence of 33.8/1000 person-years. All recorded deaths were males, with an incidence of 42.2/1000 person-years. Comparing with the age-specific mortality rates for males in French Guiana, the standardized mortality ratio was 14.8. In multivariate analysis, factors associated with death were age and CD4 count before release.
Despite access to ART while incarcerated, with good virological outcome, the post-release mortality was very high for males, almost 15 times what is observed in the general male population living in French Guiana, after age standardization. Access to ART in correctional facilities may be a necessary, but not sufficient condition to protect male inmates from death after release.
ISSN: 1932-6203

inserm-01519987
http://www.hal.inserm.fr/inserm-01519987
http://www.hal.inserm.fr/inserm-01519987/document
http://www.hal.inserm.fr/inserm-01519987/file/2017%2C%20Huber%20-%20Mortality%20HIV%20prisoners%20after%20release.pdf
DOI : 10.1371/journal.pone.0175740.t002

Éditeur(s) : HAL CCSD Taylor & Francis (Routledge)
Résumé : International audience
The Maroni basin, an isolated region delineating the border between Suriname and French Guiana has been affected by the human immunodeficiency virus (HIV) epidemic 10 years after coastal French Guiana. However, the rise in HIV prevalence was sharp, exceeding 1% within 10 years. The aim of the present study is to compare, using the first quantitative data from the general population in remote villages, the knowledge, attitudes, and behaviors regarding HIV between Maroon and Amerindian populations, the two most frequent populations living along the Maroni. Data were collected in 2012 using a structured questionnaire among a random sample of 896 individuals residing in the remote villages on the Maroni river. Proportions were compared between the Maroni and the coastal general population, and between Maroon and Amerindian populations. The present study shows significant differences between territories and between communities living on the Maroni river: the multiple sexual partnerships, more common among population living on the Maroni river, were more frequently reported in Maroons than in Amerindians. Condom use was more frequently reported among men on the Maroni river than on the coast, but these findings were reversed for women. Moreover, among people living on the Maroni river, condom use was more frequently reported among Maroons than among Amerindians. Regarding genital factors that may affect transmission, penile implant seemed to have no ethnic boundaries, steam baths seemed specific to Maroon women. The present results should help to improve community-based specific interventions.
ISSN: 0954-0121

hal-01260915
https://hal.archives-ouvertes.fr/hal-01260915
https://hal.archives-ouvertes.fr/hal-01260915/document
https://hal.archives-ouvertes.fr/hal-01260915/file/2015%2C%20Van%20Melle%20-%20Knowledge%2C%20attitudes%2C%20behaviors%2C%20and%20practices%20differences%20regarding%20HIV.pdf
DOI : 10.1080/09540121.2015.1032203

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : Total mercury (HgT) and monomethylmercury (MMHg) were investigated in a tropical head watershed (1 km(2)) of French Guiana. The watershed includes a pristine area on the hill slopes and a former gold mined flat in the bottomland. Concentrations of dissolved and particulate HgT and MMHg were measured in rain, throughfall, soil water and at three points along the stream. Samples were taken in-between and during 14 storm events at the beginning and middle of the 2005 and 2006 rainy seasons. Dissolved and particulate HgT concentrations in the stream slightly increased downstream, while dissolved and particulate MMHg concentrations were low at the pristine sub-watershed outlet (median = 0.006 ng L-1 and 1.84 ng g(-1), respectively) and sharply increased at the gold mined flat outlet (median = 0.056 ng L-1 and 6.80 ng g(-1), respectively). Oxisols, which are dominant in the pristine area act as a sink of HgT and MMHg from rain and throughfall inputs. Hydromorphic soils in the flat are strongly contaminated with Hg (including Hg droplets) and their structure has been disturbed by former gold-mining processes, leading to multiple stagnant water areas where biogeochemical conditions are favorable for methylation. In the former gold mined flat high dissolved MMHg concentrations (up to 0.8 ng L-1) were measured in puddles or suboxic soil pore waters, whereas high dissolved HgT concentrations were found in lower Eh conditions. Iron-reducing bacteria were suggested as the main methylators since highest concentrations for dissolved MMHg were associated with high dissolved ferrous iron concentrations. The connection between saturated areas and stagnant waters with the hydrographic network during rain events leads to the export of dissolved MMHg and HgT in stream waters, especially at the beginning of the rainy season. As both legal and illegal gold-mining continues to expand in French Guiana, an increase in dissolved and particulate MMHg emissions in the hydrographic network is expected. This will enhance MMHg bio-amplification and present a threat to local populations, whose diet relies mainly on fish.
Water Research (0043-1354) (Pergamon-elsevier Science Ltd), 2011-04 , Vol. 45 , N. 8 , P. 2659-2669

Droits : 2011 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00035/14628/12134.pdf
DOI:10.1016/j.watres.2011.02.022
http://archimer.ifremer.fr/doc/00035/14628/

Éditeur(s) : HAL CCSD Wiley
Résumé : International audience
White-sand forests are thought to host many ectomycorrhizal fungi, as demonstrated by the numerous fruiting body collections made by Rolf Singer in the lower Rio Negro in the late 1970s. Despite recognition of the importance of ectomycorrhizal fungi in white-sand forests, there has not yet been a systematic examination of diversity and taxonomic composition across white-sand forests, or more widely across lowland Amazonian forests. In an effort to broaden our view of ectomycorrhizal fungal diversity and distribution on white-sand forests, we collected ectomycorrhizal fruiting bodies in 10 plots of white-sand forests in Brazil and French Guiana between 2012 and 2014. We collected 221 specimens and 62 morphospecies, from the 10 plots, confirming that all studied white-sand forests host ectomycorrhizal fungi. Additionally, we searched for taxa associated with white sands among specimens deposited in Brazilian herbaria. We report 1006 unique ectomycorrhizal specimen records in 18 Brazilian herbaria, of which 137 specimens and 64 species are reported from white-sand forests, mainly in the state of Amazonas, Brazil. Russulaceae and Amanitaceae were frequent in all habitats, and Cortinarius were more frequent on white sands. Our results highlight the high diversity and heterogeneity of ectomycorrhizal communities on white-sand forests, and the wide distribution of ectomycorrhizal fungi throughout Brazil, irrespective of soil type.
Florestas em solos arenosos são consideradas como hospedeiras de muitos fungos ectomicorrízicos (EM), como demonstrado pelas numerosas coletas feitas por Rolf Singer na região do Rio Negro, Amazonas, no final dos anos 70. Apesar do reconhecimento da importância dos fungos ectomicorrízicos em florestas em solos arenosos, não houve nenhum estudo sistemático da diversidade e da composição taxonômica nas florestas em solos arenosos ou mesmo mais amplamente nas terras baixas da Floresta Amazônica. Para ter uma visão global da diversidade e da distribuição de fungos EM em florestas em solos arenosos, foram coletados basidiomas desses fungos em 10 parcelas de florestas em solos arenosos no Brasil e na Guiana Francesa entre 2012 e 2014. Além disso, uma busca foi feita por espécimes depositados em herbários brasileiros que tinham a informação de serem coletas feitas em solo arenoso. Nas 10 parcelas amostradas foram coletados 221 espécimes e 62 morfoespécies, o que confirma que todas as florestas em solos arenosos hospedam fungos EM. Recuperamos 1006 espécimes registrados em 18 herbários brasileiros, dos quais 137 espécimes e 52 espécies são registros de florestas em solos arenosos principalmente no estado do Amazonas, Brasil. Russulaceae e Amanitaceae foram frequentes em todos os habitats e Cortinarius foi o táxon mais frequente em solo arenoso. Os resultados apresentados enfatizam a alta diversidade e heterogeneidade das comunidades de EM em florestas em solos arenosos, assim como a ampla distribuição de fungos em todo o Brasil, não exclusivamente em florestas em solos arenosos.
ISSN: 0006-3606

hal-01278423
https://hal-sde.archives-ouvertes.fr/hal-01278423
DOI : 10.1111/btp.12297

Éditeur(s) : Elsevier
Résumé : The distribution and speciation of mercury (Hg) in air, rain, and surface waters from the artificial tropical lake of Petit-Saut in French Guiana were investigated during the 2003/04 period. In the air, total gaseous mercury (TGM) at the dam station averaged 12 +/- 2 pmol m(-3) of which > 98% was gaseous elemental mercury (GEM). GEM distribution depicted a day-night cycling with high concentrations (up to 15 pmol m(-3)) at dawn and low concentrations (down to 5 pmol m(-3)) at nightfall. Reactive gaseous mercury (RGM) represented < 1% of the GEM with a mean concentration of 4 3 fmol m(-3). Diel RGM variations were negatively related to GEM. In the rain, the sum of all Hg species in the unfiltered (HgTUNF) averaged 16 +/- 112 pmol L-1. Temporal distribution of HgTUNF exhibited a pattern of high concentrations during the late dry seasons (up to 57.5 pmol L-1) and low concentrations (down to 2.7 pmol L-1) in the course of the wet seasons. Unfiltered reactive (HgRUNF), dissolved gaseous (DGM) and monomethyl (MMHgUNF.) Hg constituted 20, 5 and 5% of HgTUNF, respectively. All measured Hg species were positively related and displayed negative relationships with the pH of the rain. In the reservoir surface waters, dissolved total mercury (HgTD) averaged 3.4 +/- 1.2 pmol L-1 of which 10% consisted of DGM. DGM showed a trend of high concentrations during the dry seasons (480 +/- 270 finol L-1 and lower (230 +/- 130 finol L-1) in the course of the wet seasons. Diel variations included diurnal photo-induced DGM production (of about 60 firiol L-1 h(-1)) coupled to minute to hour oxidation/ reduction cycles (of > 100 firiol L-1 amplitude). Finally, calculated atmospheric Hg inputs to the Petit-Saut reservoir represented 14 mot yr(-1) whereas DGM evasion reached 23 mol yr(-1). Apportionment among forms of Hg deposition indicated that up to 75% of the total Hg invasive flux follows the rainfall pathway. (C) 2007 Elsevier B.V. All rights reserved.
Science of The Total Environment (0048-9697) (Elsevier), 2007-10 , Vol. 385 , N. 1-3 , P. 132-145

Droits : 2007 Elsevier B.V. All rights reserved
http://archimer.ifremer.fr/doc/2007/publication-3329.pdf
DOI:10.1016/j.scitotenv.2007.06.013
http://archimer.ifremer.fr/doc/00000/3329/

Éditeur(s) : HAL CCSD Botanical Society of America
Résumé : Premise of the study : Wood density correlates with mechanical and physiological strategies of trees and is important for estimating global carbon stocks. Nonetheless, the relationship between branch and trunk xylem density has been poorly explored in neotropical trees. Here, we examine this relationship in trees from French Guiana and its variation among different families and sites, to improve the understanding of wood density in neotropical forests. Methods : Trunk and branch xylem densities were measured for 1909 trees in seven sites across French Guiana. A major-axis fit was performed to explore their general allometric relationship and its variation among different families and sites. Key results : Trunk xylem and branch xylem densities were significantly positively correlated, and their relationship explained 47% of the total variance. Trunk xylem was on average 9% denser than branch xylem. Family-level differences and interactions between family and site accounted for more than 40% of the total variance, whereas differences among sites explained little variation. Conclusions : Variation in xylem density within individual trees can be substantial, and the relationship between branch xylem and trunk xylem densities varies considerably among families and sites. As such, whole-tree biomass estimates based on non-destructive branch sampling should correct for both taxonomic and environmental factors. Furthermore, detailed estimates of the vertical distribution of wood density within individual trees are needed to determine the extent to which relying solely upon measures of trunk wood density may cause carbon stocks in tropical forests to be overestimated.
ISSN: 0002-9122

hal-01032401
https://hal.archives-ouvertes.fr/hal-01032401
DOI : 10.3732/ajb.1000034

Éditeur(s) : ISTPM
Résumé : In November and December 1959, one of us was assigned by the Credit and Technical Assistance Society (SATEC) to do a study on shrimp fishing on the Guiana Shield as practised by American trawlers (Figure 1). This study had both technological and biological goals. It was first necessary to describe the fishing boats and the methods used by American shrimp boats to fish in the Guianas. Each step of processing and packaging of the shrimp was monitored on board as well as on land, from catch up to storage under refrigerated conditions until commercialisation. It was then necessary to evaluate the relative proportions of shrimp and fish in the catches in order to establish the factors governing productivity of the operations. This was done with a view for establishing a fleet of fishing boats in French Guyana wishing to exploit as much of the catches as possible. American trawlers discard all fish and shellfish that are not marketable by American standards. The flat trawls used by ships based in Georgetown (British Guyana) or in Paramaribo (Surinam) are not designed for catching fish; but during the expedition off the shore of Surinam, we observed that a good part of catches was made up of various marketable species, including flatfishes, many goatfishes, pompano fishes, rockfishes, etc. It was thus important to weigh, insofar as possible, species that were discarded. ... (unverified OCR)
En novembre et décembre 1959, l'un de nous était chargé par la Société d'assistance technique et de crédit (SATEC) d'une étude de la pêche à la crevette telle que la pratiquent les chalutiers américains (fig. 1 ) sur le plateau continental des Guyanes. Cette étude avait deux buts, technologique et biologique. Il fallait tout d'abord décrire les engins et les méthodes utilisés par les crevettiers américains pour exploiter les fonds guyanais et suivre pas à pas le travail de transformation et de conditionnement des crustacés, à bord comme à terre, de la capture jusqu'au stockage sous froid avant la commercialisation. Il était nécessaire ensuite d'évaluer les proportions relatives des crevettes et des poissons dans les apports, ceci pour établir les facteurs de rentabilité des opérations dans le cas de la mise en place, en Guyane française, d'armements métropolitains soucieux d'utiliser la presque totalité des captures. Les chalutiers américains rejettent en effet à la mer tout ce qui n'est pas crustacé commercialisable selon les normes observées aux Etats-Unis. Certes les chaluts plats utilisés par les navires basés à Georgetown (Guyane britannique) ou à Paramaribo (Surinam) ne sont pas des engins destinés à la capture des poissons mais, au cours de la marée effectuée au large du Surinam sur l'un des bateaux sus-cités, nous avons constaté qu'une bonne partie des captures était constituée d'espèces parfaitement commercialisables, poissons plats divers, Mullidés relativement nombreux, Carangidés, Scorpénidés, etc. Il était donc important de peser, dans la mesure du possible, ce qui était rejeté à la mer. Le marché des Antilles françaises, loin d'être saturé, pouvait être ravitaillé si les moyens de transport étaient organisés et si une infrastructure « froid » suffisante était créée. Il était peut-être possible, de plus, d'envisager la création d'une conserverie utilisant les têtes de crevettes habituellement éliminées (plus de 13 % du poids total des captures), les Scorpénidés et autres espèces ichthyologiques moins appréciées de la clientèle Antillaise, et les crustacés d'intérêt secondaire pour le marché américain : Portunidés (« cyriques »), Calappidés, crevettes de petites tailles, scyllares..., pour la confection de bisques, de soupes ou de concentrés; il suffisait pour cela d'équiper les chalutiers de cuiseurs, de broyeurs et de dessiccateurs. Les résultats obtenus ont été formulés et présentés à la SATEC sous forme d'une note ronéotypée en plusieurs cahiers dont la diffusion a été relativement restreinte. Nous reprenons ici ce travail en le développant grâce à l'exploitation des carnets de note de la mission comme de l'abondante bibliographie afférente. Les auteurs américains ont en effet beaucoup publié au sujet de la biologie des différentes espèces de Penéidés exploitées, de la technologie de la pêche comme à propos de la technologie des transformations culinaires subies par les crustacés. Les statistiques les plus récentes (LYLES, 1966) montrent que les apports pour l'année 1964 (la dernière année pour laquelle nous ayons des informations complètes) furent de 96 157 tonnes environ valant quelque 70 400 000 dollars; 99 % de cette production furent capturés au chalut de fond tandis que le reste l'était au chalut à perche, aux nasses, à l'épervier ou avec d'autres engins de type artisanal. La demande en « shrimps » outre-Atlantique est loin d'être saturée et les armements américains déplacent progressivement leurs unités vers les rares points du continent américain dont le plateau continental n'a point été, jusqu'à maintenant, exploité. Les capitaux investis dans la pêèhe proprement dite, les installations à terre et les moyens de distribution sont largement supérieurs à ceux qui ont été investis à propos de la pêche au thon et l'industrie crevettière américaine fait vivre une grande partie de la population de pêcheurs des états du sud des Etats-Unis. Le travail que nous présentons ici n'a aucun 2 prétention quant à l'établissement d'une liste faunistique du plateau guyanais pas plus qu'à une étude des fonds et la détermination précise des crevettes capturées n'a pas été tentée; le lecteur devra consulter à ce sujet les travaux de Voss (1955), DURAND (1959), HOLTHUIS (1959), BULLIS et THOMPSON (1959), HIGMAN (1959)... Nous espérons cependant que les documents que nous fournissons ici seront utiles aux professionnels soucieux de se documenter sur des techniques inutilisées encore en France, comme aux fabricants de filets qui fourniront les engins réclamés par les futurs exploitants du plateau guyanais, et peut-être par ceux de Madagascar. (OCR non contrôlé)
Revue des Travaux de l'Institut des Pêches Maritimes (0035-2276) (ISTPM), 1968-12 , Vol. 32 , N. 4 , P. 477-506

Droits : Ifremer
http://archimer.ifremer.fr/doc/1968/publication-3191.pdf
http://archimer.ifremer.fr/doc/00000/3191/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé :  
In this paper, we report a study of the mating system and gene flow of Symphonia globulifera, a hermaphroditic, mainly bird-pollinated tree species with a large geographic distribution in the tropical Americas and Africa.Using three microsatellites, we analysed 534 seeds of 28 open pollinated families and 164 adults at the experimental site 'Paracou' in French Guiana. We observed, compared to other tropical tree species, relatively high values for the effective number of alleles. Significant spatial genetic structure was detected, with trees at distances up to 150 m more genetically similar than expected at random. We estimated parameters of the mating system and gene flow by using the mixed mating model and the TwoGener approach. The estimated multilocus outcrossing rate, tm, was 0.920. A significant level of biparental inbreeding and a high proportion of full-sibs were estimated for the 28 seed arrays. We estimated mean pollen dispersal distances between 27 and 53 m according to the dispersal models used. Although the adult population density of S. globulifera in Paracou was relatively high, the joint estimation of pollen dispersal and density of reproductive trees gave effective density estimates of 1.6 and 1.3trees/ha. The parameters of the mating system and gene flow are discussed in the context of spatial genetic and demographic structures, flowering phenology and pollinator composition and behaviour.
ISSN: 0018-067X

hal-01032178
https://hal.archives-ouvertes.fr/hal-01032178
DOI : 10.1038/sj.hdy.6800560

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Cette étude ouvre une réflexion sur les enjeux d’intégration sociale autour de la lecture dans le territoire de la Guyane française. Les handicaps socioéconomiques du développement de la lecture sont particulièrement importants dans ce département français. La Guyane n’appartient pas à une société de lecture ; c’est une société d’oralité déchirée entre la modernité par la lecture et l’écriture et la tradition par l’oralité. L’étude propose daller au-delà du simple diagnostic pour envisager des stratégies de développer destinées à populariser la lecture dans ce département, par exemple avec le développer de la lecture publique à partir de biblio/pirogue pour répondre à l’isolement des populations. Dans cette société marquée par l’importante proportion d’illettrisme et d’analphabétisme, et la faible pratique de la lecture, l’égalité d’accès à la lecture est défi pour l’avenir de ce territoire.
This study opens a discussion on issues of social integration around reading in the territory of French Guiana. The socio-economic handicaps the development of reading are particularly important in this department french. The Guyana who does not belong to a reading society, is an oral society torn between modernity by reading and writing and oral tradition. The studies propose to go beyond the simple diagnosis to consider development strategies designed to popularize reading in this department, for example with the development of the public reading from library on a boat to meet the isolation of populations. In this society marked by the large proportion of illiteracy and illiteracy, and low practice of reading, equal access to reading is challenge for the future of this territory.
Guyane française

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.1012
http://journals.openedition.org/etudescaribeennes/1012

Éditeur(s) : Elsevier Science Bv
Résumé : Sustainable management of natural resources, and in particular fisheries, must take into account several conflicting objectives. This is the case in the French Guiana shrimp fishery for which profitability objectives imply a reduction in the fishing activity. On the one hand, this fishery has negative externalities on marine biodiversity due to discards. On the other hand, this fishery has positive externalities on the economy of the local community and interestingly enough on a protected seabird species in the area (the Frigatebird that feeds on discards). In this paper, we examine the viability of that system considering two sustainability objectives: an economic objective in terms of the profitability of the fishing activity, and a conservation objective in terms of the Frigatebird population. For that purpose, we have developed a dynamic model of that bioeconomic system and study here the trade-offs between the two conflicting objectives. It provides a means to quantify the necessary give and takes involving the economic and ecological objectives that would ensure a viable management solution. Our study confirms the relevance of the viability approach to address natural resource management issues, which should lead to the development of new tools for the arbitration of conflicting sustainability, objectives. In particular, such tools could be used as a quantitative basis for cost-benefit analysis taking into account environmental externalities. (C) 2009 Elsevier B.V. All rights reserved.
Ecological Economics (0921-8009) (Elsevier Science Bv), 2009-10 , Vol. 68 , N. 12 , P. 2960-2968

Droits : 2009 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00020/13135/10195.pdf
DOI:10.1016/j.ecolecon.2009.06.012
http://archimer.ifremer.fr/doc/00020/13135/

Éditeur(s) : Elsevier Sci Ltd
Résumé : Like many tropical small-scale fisheries, the French Guiana coastal fishery is characterized by the high fish biodiversity of its ecosystem, the weak selectivity of the fleets exploiting the resources, and the heterogeneity of the vessels in terms of size and fishing techniques. The Rapfish method is used to assess sustainability within 11 fishery systems by means of 27 attributes relating to ecological, economic, social, and technological fields. Overall results indicate an average performance in the weak sustainability range. Comparisons made among the FSs show a gradient of sustainability performance from the western portion of the coast to the eastern portion. Several recommendations are formulated to raise the current “sustainability” status, such as the reduction of discards. This study is used as a complementary tool to the bioeconomic model in order to define a sustainable management plan for the French Guiana coastal fishery.
Marine Policy (0308-597X) (Elsevier Sci Ltd), 2014-02 , Vol. 44 , P. 397-405

Droits : 2013 Elsevier Ltd. All rights reserved.
http://archimer.ifremer.fr/doc/00162/27310/25662.pdf
DOI:10.1016/j.marpol.2013.10.003
http://archimer.ifremer.fr/doc/00162/27310/

Éditeur(s) : HAL CCSD Wiley
Résumé : 1. Trade-offs among functional traits reveal major plant strategies that can give insight into species distributions and ecosystem processes. However, current identification of plant strategies lacks the integration of root structural traits together with leaf and stem traits. 2. We examined correlations among 14 traits representing leaf, stem and woody root tissues. Traits were measured on 1084 individuals representing 758 Neotropical tree species, across 13 sites representative of the environmental variation encompassed by three widespread habitats (seasonally flooded, clay terra firme and white-sand forests) at opposite ends of Amazonia (French Guiana and Peru). 3. Woody root traits were closely aligned with stem traits, but not with leaf traits. Altogether leaf, stem and woody root traits delineated two orthogonal axes of functional trade-offs: a first axis defined by leaf traits, corresponding to a leaf economics spectrum, and a second axis defined by covarying stem and woody root traits, corresponding to a wood economics spectrum. These axes remained consistent when accounting for species evolutionary history with phylogenetically independent contrasts. 4. Despite the strong species turnover across sites, the covariation among root and stem structural traits as well as their orthogonality to leaf traits were strongly consistent across habitats and regions. 5. We conclude that root structural traits mirrored stem traits rather than leaf traits in Neotropical trees. Leaf and wood traits define an integrated whole-plant strategy in lowland South American forests that may contribute to a more complete understanding of plant responses to global changes in both correlative and modelling approaches. We suggest further meta-analyses in expanded environmental and geographic zones to determine the generality of this pattern.
ISSN: 0269-8463

hal-01032415
https://hal.archives-ouvertes.fr/hal-01032415
DOI : 10.1111/j.1365-2435.2012.02020.x

Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé : International audience
Cervical cancer is the second most frequent cancer in women in French Guiana. Studies have shown that populations living in the remote areas of the interior have early sexual debut and that multiple sexual partnerships are common. The objective of the present study was thus to determine the prevalence of human papillomavirus (HPV) infection in these areas. A study was conducted in women aged 20-65 years with previous sexual activity. Women were included on a voluntary basis after using local media and leaders to inform them of the visit of the team. HPV infection was defined by the detection of HPV DNA using the Greiner Bio-One kit. In addition to HPV testing cytology was performed. The overall age-standardized prevalence rate was 35%. There was a U-shaped evolution of HPV prevalence by age with women aged >50 years at highest risk for HPV, followed by the 20-29 years group. Twenty-seven percent of women with a positive HPV test had normal cytology. Given the high incidence of cervical cancer in French Guiana and the high prevalence of HPV infections the present results re-emphasize the need for screening for cervical cancer in these remote areas. Vaccination against HPV, preferably with a nonavalent vaccine, also seems an important prevention measure. However, in this region where a large portion of the population has no health insurance, this still represents a challenge.
ISSN: 0950-2688

inserm-01476015
http://www.hal.inserm.fr/inserm-01476015
http://www.hal.inserm.fr/inserm-01476015/document
http://www.hal.inserm.fr/inserm-01476015/file/High%20prevalence%20HPV%20infection%20in%20women%20living%20in%20the%20remote%20territories%20of%20French%20Guiana%20STD.pdf
http://www.hal.inserm.fr/inserm-01476015/file/Table%203.pdf

Éditeur(s) : HAL CCSD De Gruyter
Résumé : International audience
This article examines the case of Kali'na, a minority Indigenous language of French Guiana, from the point of view of descriptive categories available in the literature (namely dominated language, minoritized language, endangered language). These terms are discussed, favouring more dynamic categories which focus on processes (minoritization/deminoritization). The article uses both micro- and macrosociolinguistic levels of analysis. At the macro level, indicators are proposed to gauge the minorization of Kali'na as it occurs on the scale of Guiana as a whole, by observing attitudes towards Kali'na language and culture, particularly as expressed in the media and in epilinguistic comments made by speakers. At the local level, we explore the effects of the recognition by the State of a Kali'na township and their influence on language minoritization in the village and more generally at the level of the linguistic community. We also attempt to determine to what extent, as far as interactions are concerned, alternations and code switching between Kali'na and French might constitute indicators of the process of minoritization or deminoritization or of language death currently underway.
ISSN: 0165-2516

halshs-00292394
https://halshs.archives-ouvertes.fr/halshs-00292394
https://halshs.archives-ouvertes.fr/halshs-00292394/document
https://halshs.archives-ouvertes.fr/halshs-00292394/file/2006-leglise-alby-minorization.pdf

Éditeur(s) : HAL CCSD Cambridge University Press (CUP)
Résumé : The natural 15N abundance method for estimating symbiotic biological N2-fixation was tested on legume trees from two rain forests on contrasting soils (oxisols and spodosols) in French Guiana. When possible, the significance of N2-fixing species in the plant community was evaluated in terms of density, biomass and contribution of N2-fixation to the building up of the total nitrogen mass in the leaves. Of the two sites, the rain forest on spodosols was the less favourable for application of the [delta]15N method: the available soil nitrogen was isotopically similar to fixed-N2. Hence, the results showed that a reliable estimate of N2-fixation could not be obtained. A substantial contribution of fixed-N2 to the nitrogen nutrition of legumes was found on oxisols, with an average value of 54 % Ndfa (Nitrogen derived from the atmosphere). The contribution of the N2-fixing legumes to the biomass of the stand was estimated to be 2 t ha[minus sign]1 for the leaf biomass and 136 t ha[minus sign]1 for the total above-ground plant biomass. With 7.5 % of trees in the stand able to fix N2 (462 out of 6156), N2-fixation was estimated to be 7 kg ha[minus sign]1 y[minus sign]1. These results are the first use of the [delta]15N method to estimate nitrogen input by N2-fixing legumes to a natural rain forest. The inter-site variability observed in the [delta]15N of the non-fixing plants suggested different nitrogen-cycling processes in the two soils. The [delta]15N of the non-N2-fixing plants could be related to the soil nitrogen availability and be used as an indicator of efficient or non-efficient nitrogen-cycling rain forests. The spatial variability of the [delta]15N in the plant-available soil nitrogen pool and the nitrogen balance in tropical rain forests are discussed.
ISSN: 0266-4674

hal-01032201
https://hal.archives-ouvertes.fr/hal-01032201
DOI : 10.1017/S0266467499000644

Résumé : Le mérou géant, Epinephelus itajara, espèce en danger critique d’extinction au niveau mondial, est présent dans les eaux turbides et saumâtres de la Guyane française où l’espèce est exploitée par une pêcherie côtière. Dans la partie est du plateau continental guyanais, les mérous géants se localisent autour de tous les sites rocheux marins où ils se répartissent en fonction de la profondeur et du faciès (éboulis ou tombant). Les analyses des isotopes stables du carbone et de l’azote suggèrent qu’environ 30 % des mérous géants < 115 cm présents sur ces sites rocheux, proviendraient des mangroves alentours. Les analyses de contenus stomacaux révèlent un changement ontogénétique du régime alimentaire. Les petits individus (< 90 cm) s’alimentent principalement de Crustacés puis intègrent progressivement les poissons à leur alimentation jusqu’à devenir essentiellement piscivores au-delà de 140 cm. La population de Guyane est principalement composée d’individus juvéniles : seulement 8,5 % des individus capturés en Guyane a plus de 6 ans. Ces jeunes mérous sont très territoriaux durant les 4-5 premières années de leur vie puis ne sont plus retrouvés sur les sites rocheux. Le devenir de ces juvéniles est incertain, soit ils sont pêchés, soit ils migrent vers d’autres sites ou vers les agrégations de reproduction. Cependant, les mérous géants ne semblent pas se reproduire en Guyane. Il est possible que les conditions environnementales (forte turbidité et température) ne favorisent pas le développement gonadique, ce qui engendrerait une omission totale de reproduction. Le suivi par tags satellite suggère que les mérous géants migrent dans le sens des courants marins vers Trinidad-et-Tobago, potentiellement pour la reproduction. Aucun mouvement vers le Brésil n’a été mis en évidence bien que les stocks de mérous géants du Brésil et de Guyane semblent liés. En effet, ces deux stocks évoluent conjointement avec un déclin des populations au début des années 90. Le maintien de la population de mérou géant en Guyane se ferait grâce à l’apport de larves des sites d’agrégation du Brésil par le courant marin. La mortalité totale des mérous géants (0,65) est aussi élevée au sein de la réserve marine ainsi que sur les sites de pêche. Cela suggère que l’interdiction de pêche à la réserve n’est pas respectée et que les grands individus quittent la réserve pour des sites plus spacieux. En supposant que la population de mérous géants adultes a été réduite à cause de la pêche, une protection régionale des individus > 150 cm doit être instaurée afin de régénérer le stock d’individus matures. Il semble nécessaire de développer une politique de gestion internationale de l’espèce, surtout entre la Guyane et le Brésil, afin de conserver les populations de mérous géants d’Amérique du Sud.
The critically endangered Goliath Grouper, Epinephelus itajara, is found in the turbid and brackish waters of French Guiana, where the species is subject to a coastal fishery. Goliath Grouper populations inhabit all rocky habitats and exhibit increasing abundance with depth. Around 30% of individuals less than 115 cm may derive from the abundant mangrove habitat along the french Guiana coast. There is a ontogenetic shift of the diet, primarily crustacivorous, individuals >140 cm become piscivorous. The Goliath Grouper population in French Guiana is composed primarily og juvelines. The fate of the juvelines is unknonw, some may be caught in the fishery, others may move to other habitat. No evidence of spawning or gonadal readiness was found in french Guiana. it is possible that environmental conditions (high turbidity and temperature) are not conducive to reproductive activity. Goliath Grouper may migrate down current from French Guiana to Trinidad and Tobago or further. No movement of Goliath Grouper was found against the current toward Brazil. French Guiana juveniles may be derived from spawns occuring off Brazil. Calculated total mortality of Goliath Grouper off French Guiana is high (0.65) in both fished and protected areas suggesting that illegal fishing is occuring within the protected area, or that emigration rates are high. Assuming that the adult population of Goliath Grouper in French Guiana has been reduced due to fishing, protection of spawning-size adults (larger than about 150 cm TL) should be instated.

http://www.theses.fr/2014AGUY0721/document

Éditeur(s) : HAL CCSD
Résumé : The forests of French Guiana occupy a central part of the region’s potential resource base, but as yet remain almost completely unexploited. This stems from the forestry industry struggling to valorize wood stocks of a high diversity with an extremely heterogeneous distribution. Indeed, identifying essences for future propagation is an issue of both environmental and socio-economic importance for the region. Bagassa guianensis Aubl. and Cordia alliodora (Ruiz & Pav.) Oken. go against conventional models, in that they display the life history characteristics of rapid growth and wood of high quality, and thus are species of high potential for future plantations. Firstly, our study of growth characteristics reveals a defined strategy half way between long-lived species and pioneer species. It is the variability of basic density of wood which is a key trait allowing for such a development, favoring rapid growth in initial years whilst allowing for tree longevity. Secondly, the analysis of a range of wood properties (shrinkage, modulus of elasticity, durability) in relation to tree growth confirms the technologic quality of the two species. It also enables the emergence of new results like the effect of extractives on wood stability, the control of growth as a result of basic density variation, the evolution of leaf traits throughout tree development or the improvement of trunk maintenance thanks to interlocked grain. The knowledge gained in relation to the developmental traits of these two species, and to the quality of their wood allows for the elaboration of plantation projects and what will be required for their success. The results of this study can orientate future studies on novel species for commercialization in French Guiana.
La ressource forestière en Guyane occupe une place maîtresse au sein de la région et est encore majoritairement préservée, mais la filière bois parvient difficilement à valoriser la biodiversité locale en raison de l’hétérogénéité de la ressource. Identifier les essences à planter demain représente aujourd’hui un enjeu à la fois environnemental, économique et social pour la Guyane. Bagassa guianensis Aubl. et Cordia alliodora (Ruiz & Pav.) Oken. vont à l’encontre des modèles usuels en associant vitesse de croissance et qualité du bois et sont identifiées comme prometteuses pour la plantation. Dans un premier temps, l’étude de la dynamique de croissance des deux espèces révèle un modèle écologique singulier, à la fois pionnières et longévives. La variabilité de l’infradensité dans l’arbre est l’élément clé qui permet un tel développement, favorisant une croissance rapide dans les premières années tout en assurant la longévité de l’individu. Dans une seconde partie, l’analyse d’un large panel de propriétés du bois (retrait, module, durabilité) en lien avec le développement de l’arbre confirme les qualités technologiques des deux espèces et permet l’émergence de résultats novateurs tels que le rôle des extractibles sur le retrait, le contrôle de la croissance grâce aux variations d’infradensité, l’évolution des traits foliaires au cours de l’ontogénie ou encore la mise en place de contrefil dans l’arbre pour assurer son maintien. La connaissance acquise vis-à-vis du mode de développement de ces deux espèces et des facteurs influençant la qualité de leur bois permet aujourd’hui de définir avec plus de précision le cadre d’un projet de plantation et les conditions de son succès. Les résultats de cette étude permettent finalement d’orienter la recherche de nouvelles espèces d’avenir pour la plantation en Guyane.
https://tel.archives-ouvertes.fr/tel-01338281

tel-01338281
https://tel.archives-ouvertes.fr/tel-01338281
https://tel.archives-ouvertes.fr/tel-01338281/document
https://tel.archives-ouvertes.fr/tel-01338281/file/Th%C3%A8se%20Julie%20Bossu.pdf

Éditeur(s) : HAL CCSD Public Library of Science
Résumé : International audience
IntroductionLeishmania RNA virus type 1 (LRV1) is an endosymbiont of some Leishmania (Vianna) species in South America. Presence of LRV1 in parasites exacerbates disease severity in animal models and humans, related to a disproportioned innate immune response, and is correlated with drug treatment failures in humans. Although the virus was identified decades ago, its genomic diversity has been overlooked until now.Methodology/Principles findingsWe subjected LRV1 strains from 19 L. (V.) guyanensis and one L. (V.) braziliensis isolates obtained from cutaneous leishmaniasis samples identified throughout French Guiana with next-generation sequencing and de novo sequence assembly. We generated and analyzed 24 unique LRV1 sequences over their full-length coding regions. Multiple alignment of these new sequences revealed variability (0.5%±23.5%) across the entire sequence except for highly conserved motifs within the 5' untranslated region. Phylogenetic analyses showed that viral genomes of L. (V.) guyanensis grouped into five distinct clusters. They further showed a species-dependent clustering between viral genomes of L. (V.) guyanensis and L. (V.) braziliensis, confirming a long-term co-evolutionary history. Noteworthy, we identified cases of multiple LRV1 infections in three of the 20 Leishmania isolates.Conclusions/SignificanceHere, we present the first-ever estimate of LRV1 genomic diversity that exists in Leishmania (V.) guyanensis parasites. Genetic characterization and phylogenetic analyses of these viruses has shed light on their evolutionary relationships. To our knowledge, this study is also the first to report cases of multiple LRV1 infections in some parasites. Finally, this work has made it possible to develop molecular tools for adequate identification and genotyping of LRV1 strains for diagnostic purposes. Given the suspected worsening role of LRV1 infection in the pathogenesis of human leishmaniasis, these data have a major impact from a clinical viewpoint and for the management of Leishmania-infected patients.
ISSN: 1935-2727

pasteur-01583523
https://hal-riip.archives-ouvertes.fr/pasteur-01583523
DOI : 10.1371/journal.pntd.0005764
PUBMED : 28715422

Éditeur(s) : HAL CCSD
Résumé :  
absent
Annual Meeting of the Association for Tropical Biology and Conversation
Paramaribo, Suriname

hal-01032073
https://hal.archives-ouvertes.fr/hal-01032073

Éditeur(s) : HAL CCSD BioMed Central
Résumé : International audience
BACKGROUND: In a malaria-endemic area the distribution of patients is neither constant in time nor homogeneous in space. The WHO recommends the stratification of malaria risk on a fine geographical scale. In the village of Cacao in French Guiana, the study of the spatial and temporal distribution of malaria cases, during an epidemic, allowed a better understanding of the environmental factors promoting malaria transmission. METHODS: A dynamic cohort of 839 persons living in 176 households (only people residing permanently in the village) was constituted between January 1st, 2002 and December 31st, 2007.The information about the number of inhabitants per household, the number of confirmed cases of Plasmodium vivax and house GPS coordinates were collected to search for spatial or temporal clustering using Kurlldorff's statistical method. RESULTS: Of the 839 persons living permanently in the village of Cacao, 359 persons presented at least one vivax malaria episode between 2002 and 2007. Five temporal clusters and four spatial clusters were identified during the study period. In all temporal clusters, April was included. Two spatial clusters were localized at the north of the village near the Comté River and two others localized close to orchards. CONCLUSION: The spatial heterogeneity of malaria in the village may have been influenced by environmental disturbances due to local agricultural policies: deforestation, cultures of fresh produce, or drainage of water for agriculture. This study allowed generating behavioural, entomological, or environmental hypotheses that could be useful to improve prevention campaigns.
ISSN: 1475-2875

inserm-00849010
http://www.hal.inserm.fr/inserm-00849010
http://www.hal.inserm.fr/inserm-00849010/document
http://www.hal.inserm.fr/inserm-00849010/file/2013_Basurko_-_Deforestation_agriculture_and_farm_jobs_a_good_recipe_for_Plasmodium_vivax_in_French_Guiana.pdf
DOI : 10.1186/1475-2875-12-90