Éditeur(s) : EDP Sciences
Résumé : Batch fecundity and relative fecundity of swordfish (Xiphias gladius) in the southwestern Indian Ocean were estimated from seven gravid swordfish females (size range 127-225 cm lower jaw-to-fork length, LJFL) with unovulated, hydrated oocytes collected onboard Reunion-based (France) longline swordfish fishing vessels between December 1999 to January 2001. To investigate the spawning pattern of swordfish, we used data collected through a combination of two at sea sampling regimes. A total of 17 007 geo-located size data of swordfish were recorded during 8 years (1993-2001) and a total of 1727 (size range 75-289 cm, LJFL) swordfish gonads (1107 females and 620 males) were sampled from May 1998 to January 2001. The estimated batch fecundity ranged from 995 000 hydrated oocytes for the smallest ripe female to 4.3 millions for the largest female sampled measuring respectively 127 to 225 cm in curved length (LJFL). The relative fecundity ranged from 25 to 72 hydrated oocytes per gram of body weight. We found that batch fecundity was positively correlated with fish length and that the older/larger females have earlier and longer spawning seasons than younger/smaller females. These findings suggested that older/larger females which are seasonally migrating in this spawning ground seem to play a major role in reproductive success of the species in producing significantly more offspring than younger females during an extended spawning season. Examination of the length-frequency date from the fishery indicated that the young fish are resident around Reunion and around the seamounts off Reunion Island. Our results highlight the important role of the older/larger females in the reproductive capacity of southwestern Indian Ocean stock. We discuss the potential implications of fishing the older/larger females for this stock in terms of reproduction and recruitment.
La fécondité par acte de ponte et la fécondité relative chez l'espadon (Xiphias gladius) dans le sud-ouest de l'océan Indien sont estimées d'après sept femelles de taille comprise entre 127 et 225 cm (de l'extrémité de la mâchoire inférieure à la fourche caudale) ; celles-ci ayant atteint la maturité sexuelle, les ovaires contenant des ovocytes hydratés. Ces femelles ont été pêchées entre décembre 1999 et janvier 2001, par des palangriers ciblant l'espadon et basés à La Réunion. La stratégie de la reproduction chez l'espadon a été étudiée en utilisant des données collectées au cours de deux campagnes d'échantillonnages en mer : soit 17 007 mensurations géo-référencées d'espadons, de 75 à 289 cm, qui ont été enregistrées durant les 8 années d'étude (1993-2001) et 1727 gonades d'espadon (1107 femelles et 620 mâles) prélevées entre mai 1998 et juin 2001.La fécondité par acte de ponte estimée varie de 995 000 ovocytes hydratés, pour la plus petite femelle (127 cm), à 4,3 millions pour la plus grande femelle (225 cm). La fécondité par acte de ponte est corrélée positivement à la taille du poisson. La fécondité relative s'étend de 25 à 72 ovocytes hydratés par gramme de poids de corps. Les femelles les plus âgées/grandes pondent plus tôt et sur une période plus grande que les plus jeunes/petites femelles. Ainsi, les femelles plus âgées/grandes qui migrent de façon saisonnière vers cette aire de ponte, contribueraient plus largement au renouvellement de l'espèce en produisant de façon significative davantage de recrues que les femelles plus jeunes et ceci pendant une saison de ponte plus étendue. Par ailleurs, les jeunes individus semblent séjourner aux abords de l'île de La Réunion et des monts sous-marins situés au large. Nos résultats soulignent l'importance du rôle des femelles âgées/grandes dans la capacité reproductrice du stock d'espadon du sud-ouest de l'océan Indien. Les implications potentielles de la pêche : des femelles âgées et de grandes tailles sont discutées pour ce stock, du point de vue de la reproduction et du recrutement.
Aquatic Living Resources (0990-7440) (EDP Sciences), 2009 , Vol. 22 , N. 1 , P. 59-68

Droits : 2009 EDP Sciences
http://archimer.ifremer.fr/doc/2009/publication-6354.pdf
DOI:10.1051/alr/2009012
http://archimer.ifremer.fr/doc/00000/6354/

Éditeur(s) : HAL CCSD Taylor & Francis
Résumé : Modern geochronology has moved beyond the acquisition of dates: the goal is to understand the significance of these numbers for the geodynamic evolution of Earth at all scales. The coupling of the laser-ablation microprobe (LAM) to inductively coupled plasma mass spectrometers (ICPMS, multicollector (MC)-ICPMS) has revolutionised geochronology and geochemistry over the last 10 years. These systems enable the rapid and precise in situ analysis of trace-element patterns and isotopic systems, while adding information related to microstructural context and major-element composition. The integration of these multiple sources of data is crucial in constraining the origin of the sample and the processes leading to its formation, so that we can understand the meaning of a date in terms of geological events. LAM-ICPMS measurement of U-Pb ages and trace-element patterns in zircon, coupled with LAM-MC-ICPMS analysis of Hf isotopes in the same grains, gives new insights into the processes of magma genesis. Applied to detrital zircons from modern drainages or sedimentary rocks (the TerraneChron approach), it becomes a powerful tool to investigate problems of crustal evolution on scales ranging from single terranes to continents. The in situ analysis (LAM-MC-ICPMS) of Re-Os systematics in single grains of sulfides in mantle-derived peridotites has demonstrated that most mantle rocks contain several generations of Os-bearing sulfides; whole-rock analyses are mixtures reflecting multiple melting and metasomatic events in the lithospheric mantle. These deep-seated events are commonly mirrored in the crust; Os model-age spectra from xenolith suites show age 'peaks' that correspond to the ages of thermal/tectonic events in the overlying crust, suggesting strong linkages between crust and mantle. Integrated studies of the timing and nature of crustal and mantle events, using these techniques, will be important for understanding the large-scale dynamics of the Earth.
ISSN: 0812-0099

hal-00411328
https://hal.archives-ouvertes.fr/hal-00411328
DOI : 10.1080/08120090802097450

Résumé : The caledonian blue shrimp Litopenaeus stylirostris is the second largest export commodity in New Caledonia. This industry is based on 19 production farms but also four hatcheries, two feed production units and two packing plants. The maximum production was reached in 2005 with 2400 tons. Supply of juveniles by hatchery is the bottle neck of the production chain because this species is not present in the natural environment. Recent problems of larval survival led some scientists to work on eco-physiology to propose adaptations of larval rearing protocol. Salinity of the rearing environment is taken as an example to study the influence of abiotic parameters on the animal physiology according to its development stage. The influence of salinity on survival and growth was evaluated at different development stages in Litopenaeus stylirostris. The study showed that ocean salinity (33-35 ppt) should be maintained during the larval stage, but after the post-larval metamorphosis, better growth could be achieved by lowering the salinity gradually to 27 ppt. This measure is now applied routinely in the Saint Vincent's hatchery and is the result of research in eco-physiology showing that the blue shrimp iso-osmotic point is around 27 ppt.
La crevette bleue calédonienne Litopenaeus stylirostris est au deuxième rang des produits exportés en Nouvelle-Calédonie. L’industrie crevetticole calédonienne est basée sur 19 fermes de production mais également 4 écloseries, 2 provendiers et 2 usines de conditionnement. La production maximale a été atteinte en 2005 avec 2400 tonnes. La fourniture de juvéniles par les écloseries est le point crucial de la chaîne de production car cette espèce n’est pas présente dans le milieu naturel. Les récents problèmes de survie larvaire ont orienté une partie de la recherche vers l’éco-physiologie en vue de proposer des adaptations du protocole d’élevage. La salinité du milieu d’élevage est prise comme exemple pour étudier l’influence d’un paramètre abiotique sur la physiologie de l’animal en fonction de son stade de développement. L’influence de la salinité sur la survie et la croissance a été évaluée aux différents stades de développement chez Litopenaeus stylirostris. L'étude a permis de montrer que la salinité océanique (33-35 ppt) devait être maintenue durant la phase larvaire mais qu'après la métamorphose en post-larve, une meilleure croissance pouvait être obtenue en abaissant la salinité progressivement à 27 ppt. Cette mesure est maintenant appliquée en routine en élevage larvaire à l'écloserie de Saint-Vincent et découle des recherches menées en éco-physiologie qui situe le point iso-osmotique de la crevette bleue autour de 27 ppt.

Droits : 2011 Ifremer
http://archimer.ifremer.fr/doc/00115/22658/20603.pdf
http://archimer.ifremer.fr/doc/00115/22658/

Éditeur(s) : HAL CCSD Frontiers
Résumé : International audience
Important set of studies have demonstrated the endocrine disrupting activity of Bisphenol A (BPA). The present work aimed at defining estrogenic-like activity of several BPA structural analogs, including BPS, BPF, BPAF, and BPAP, on 4- or 7-day post-fertilization (dpf) zebrafish larva as an in vivo model. We measured the induction level of the estrogen-sensitive marker cyp19a1b gene (Aromatase B), expressed in the brain, using three different in situ/in vivo strategies: (1) Quantification of cyp19a1b transcripts using RT-qPCR in wild type 7-dpf larva brains exposed to bisphenols; (2) Detection and distribution of cyp19a1b transcripts using in situ hybridization on 7-dpf brain sections (hypothalamus); and (3) Quantification of the cyp19a1b promoter activity in live cyp19a1b-GFP transgenic zebrafish (EASZY assay) at 4-dpf larval stage. These three different experimental approaches demonstrated that BPS, BPF, or BPAF exposure, similarly to BPA, significantly activates the expression of the estrogenic marker in the brain of developing zebrafish. In vitro experiments using both reporter gene assay in a glial cell context and competitive ligand binding assays strongly suggested that up-regulation of cyp19a1b is largely mediated by the zebrafish estrogen nuclear receptor alpha (zfERα). Importantly, and in contrast to other tested bisphenol A analogs, the bisphenol AP (BPAP) did not show estrogenic activity in our model
ISSN: 1662-4548

hal-01299976
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01299976
PUBMED : 27047331
DOI : 10.3389/fnins.2016.00112
PUBMEDCENTRAL : PMC4805609

Éditeur(s) : HAL CCSD
Résumé : Among erosion processes, river incision is classicaly described as a key process controlling erosion of landscapes. Incision efficiency is mainly influenced by climate and erodibility. This latter is not only dependent on the nature of the bedrock, but also on its past deformation, which affects its rheological effective properties, such as fracture density. The main objectives of this thesis are: (1) to better constrain the relationship between effective properties and erodibility, and (2) to quantify the influence of erodibility and erosion on both the temporal and spatial building or decay of the topography. Several numerical tools are developed. A 1D formalism of landscape evolution is introduced, including river incision with stochastic distribution of water discharge and hillslope landsliding. A new remeshing algorithm called Surface Lagrangian Remeshing (SLR) is developed as a complement to remeshing algorithms dealing with internal elements. It allows one to take into account long-term erosion into 2D Lagrangian numerical codes based on triangular finite elements. Then the potentiality of measuring erodibility in-situ using a Schmidt hammer (R) is assessed for the active orogen of Taiwan, the diagenetic Annot sandstones and St Clement fault zone. Results suggest a strong control of R by effective properties. A linear model based on effective medium theory is applied to a fault zone with an unmacthed resolution (750 measures, 25 measures per square meter). The model successfully correlates R to fracture density. These results demonstrate that effective elasticity as well as erodibility are sensitive to the density and type of fractures. Finally I focus on the erosional and rheological conditions that allows reproducing post-orogenic evolution of mountain belts. A model coupling surface erosion and regional isostatic uplift is consistent with observations. The topographic decay and decrease of the ratio of surface elevation over crustal root thickness is at first order controlled by the initial geometry of the mountain belt and erosion efficiency. This new model highlights the control ofclimate and erodibility on the topographic decay and of lithospheric rheology on the perseverance of crustal roots.
Parmi les processus d'érosion, l'incision des rivières est classiquement décrit comme un processus clé contrôlant l'érosion des paysages. L'efficacité de l'incision est principalement influencée par le climat et par l'érodabilité. Ce dernier paramètre ne dépend pas seulement de la nature du substratum rocheux, mais aussi de sa déformation passée qui affecte ses propriétés rhéologiques équivalentes. Les principaux objectifs de cette thèse sont: (1) de mieux contraindre les relations entre propriétés équivalentes et érodabilité, et (2) de quantifier l'influence de l'érosion et de l'érodabilité sur la formation ou la décadence, spatiale et temporelle, de la topographie. Plusieurs outils numériques sont développés. Un formalisme 1D d'évolution des paysages est proposé, prenant en compte simultanément l'incision des rivières avec une distribution stochastique des débits en eau et l'érosion des versants par glissements de terrain. Un nouvel algorithme de remaillage appelé Surface Lagrangian Remeshing (SLR) est développé. Il permet de prendre en compte l'érosion à long terme dans les codes numériques 2D Lagrangiens basés sur des éléments finis triangulaires. Ensuite, la possibilité de mesurer in-situ l'érodabilité avec un marteau de Schmidt (R) est évaluée pour: l'orogène actif de Taiwan, les grès diagénétiques d'Annot et la zone de faille de St Clément. Les résultats suggèrent un fort contrôle de R par les propriétés équivalentes des roches testées. Un modèle linéaire, basé sur la théorie des milieux équivalents, est appliqué à une zone de faille avec une résolution inégalée (750 mesures, 25 mesures par mètre carré). Le modèle permet de corréler avec succès la densité de fracture et R. Ces résultats démontrent empiriquement que l'élasticité équivalente ainsi que l'érodabilité sont sensibles à la densité et à la nature des fractures. Enfin j'étudie les conditions d'érosion et de rhéologie qui permettent de reproduire l'évolution des chaînes de montagnes post-orogéniques. Un modèle couplant érosion en surface et soulèvement isostatique régional est compatible avec les observations. Les taux de décroissance topographique et de diminution du rapport de l'élévation de surface sur l'épaisseur de racine crustale sont contrôlés au premier ordre par la géométrie initiale de la chaîne de montagne et par l'efficacité de l'érosion. Ce nouveau modèle met en évidence le contrôle du climat et de l'érodabilité sur la décroissance topographique et de la rhéologie lithosphérique sur la persévérance des racines crustales.
https://tel.archives-ouvertes.fr/tel-00602341

tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341
https://tel.archives-ouvertes.fr/tel-00602341/document
https://tel.archives-ouvertes.fr/tel-00602341/file/thesephilippesteer.pdf

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
Background Experimental evidence suggests that developmental exposure to persistent organic pollutants (POP) and to some non persistent pesticides may disrupt metabolic regulation of glucose metabolism and insulin secretion, and thereby contribute to the current epidemic of obesity and metabolic disorders. Quasi-experimental situations of undernutrition in utero have provided some information. However, the evidence in humans concerning the role of the prenatal environment in these disorders is contradictory, and little is known about long-term outcomes, such as type 2 diabetes, of prenatal exposure. Objectives Our aim was to evaluate the effects of prenatal exposure to POP and organophosphate pesticides on fetal markers of glucose metabolism in a sample of newborns from the Pelagie mother–child cohort in Brittany (France). Methods Dialkylphosphate (DAP) metabolites of organophosphate pesticides were measured in maternal urine collected at the beginning of pregnancy. Cord blood was assayed for polychlorinated biphenyl congener 153 (PCB153), p,p′-dichlorodiphenyl dichloroethene (DDE) and other POP. Insulin and adiponectin were determined in cord blood serum (n=268). Results A decrease in adiponectin and insulin levels was observed with increasing levels of DDE, but only in girls and not boys. Adiponectin levels were not related to the concentrations of other POP or DAP metabolites. Decreasing insulin levels were observed with increasing PCB153 concentrations. Insulin levels increased with DAP urinary levels. Additional adjustment for BMI z-score at birth modified some of these relations. Conclusions Our observations bring support for a potential role of organophosphate pesticides and POP in alterations to glucose metabolism observable at birth
ISSN: 0013-9351

hal-01259218
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01259218
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01259218/document
https://hal-univ-rennes1.archives-ouvertes.fr/hal-01259218/file/Prenatal%20exposure%20to%20persistent%20organic%20pollutants%20and%20organophosphate%20pesticides%2C%20and%20markers%20of%20glucose%20metabolism%20at%20birth.pdf
DOI : 10.1016/j.envres.2016.01.005

Éditeur(s) : Elsevier Science Bv
Résumé : Small-scale fisheries have traditionally received less research effort than large-scale fisheries and are generally under-studied in Europe. In spite of their comparatively low volume of catches and economic importance, small-scale fisheries are socially important and an integral part of the European coastal zone. Considering the high heterogeneity of situations and the paucity of quantitative data, we used an analytical methodology based on the comparative method. We carried out an analysis of small-scale fisheries (SSFs) in Europe based on a selection of nine case studies. Our objective was to obtain a comprehensive description of small-scale fleets covering different areas/fisheries/species, encompassing the diversity and specific conditions under which SSFs operate, in order to demonstrate the ecological and social sustainability of this often overlooked fisheries segment. A common approach formulated so that the case studies could be compared with the case histories of other competing users, required that for each set of criteria – technical, biological, socio-economic, and institutional – a set of relevant items and indicators was established. An analysis of characteristics common to the selected case studies is conducted and an attempt made to extend our comparisons to the whole of the European Union. Our results show that (as compared with large-scale fleets, their main competitor) small-scale fleets: (i) are composed of smaller vessels and, consequently, travel lower distances to fishing grounds, and are more reliant on coastal areas; (ii) have smaller crews (although the global employment figure is similar to that of large-scale fleets in Europe); (iii) use mostly, but not exclusively, passive gears; (iv) use multi-purpose fishing approaches, and can change the fish species they target during the year; (v) have lower extraction rates; (vi) have lower total capital investments (including fishing rights), turnover and costs; and (vii) have lower fuel consumption, making them less sensitive to changing oil prices. Dependence on subsidies is lower (viii). Involvement in fisheries management is variable, conservation and access regulation measures are largely local in origin. For the selected case studies, the most significant competitors are large-scale fleets, and recreational fisheries, but other sources of interaction (water quality, invasive species, etc.) cannot be ignored.
Fisheries Research (0165-7836) (Elsevier Science Bv), 2013-02 , Vol. 140 , P. 1-13

Droits : 2012 Elsevier B.V. All rights reserved
http://archimer.ifremer.fr/doc/00118/22934/20757.pdf
DOI:10.1016/j.fishres.2012.11.008
http://archimer.ifremer.fr/doc/00118/22934/

Éditeur(s) : HAL CCSD
Résumé : In order to minimize CO2 atmospheric concentration, a solution consists in sequestrating CO2 in geological reservoirs. To estimate long term risks, it is necessary to quantify the couplings between reaction processes as well as structural and hydrodynamical modifications. We realised two experimental benches enabling injecting CO2-enriched-brine in conditions corresponding to in situ storage (T < 200 oC and P < 200 bar) and developed
an experimental protocol using X-Ray microtomography and fluid and rock analyses in order to measure the variations of physical and chemical parameters.
The study of carbonated reservoirs near the injection well, allows quantifying different k-phi relationships depending on the dissolution processes and triggered by the local fluid chemical composition and initials conditions. Away from the injection well, we observe carbonate precipitation decreasing the permeability. The study of fracturated caprock samples shows that alternative percolation of CO2-enriched-brine and CO2 gas increases the fracture permeability.
The study of silicated rocks indicates carbonate precipitation in zeolite sandstone and sintered dunite grains. Nevertheless, in zeolite sandstone we also observe the precipitation of clay particles located in the uid pathways which decrease strongly the permeability.
Afin de minimiser la concentration en CO2 dans l'atmosphère une solution consiste à le séquestrer dans les réservoirs géologiques. Pour évaluer les risques à long terme, il est nécessaire de quantifier les couplages entre les processus réactionnels et les modifications structurales et hydrodynamiques. Dans cette optique, nous avons construit deux dispositifs expérimentaux permettant d'injecter des saumures chargées en CO2 dans les conditions de stockage (T < 200 °C et P < 200 bar) et mis en oeuvre un protocole expérimental utilisant la microtomographie RX et l'analyse des roches et des fuides pour quantifier les variations des paramètres physiques et chimiques. Dans le cas des réservoirs carbonatés, on observe, près du puits d'injection, une forte variabilité des relations k-phi en fonction du régime de dissolution contrôlé par la chimie locale du fluide, ainsi que par les conditions initiales. A plus grande distance, on observe des processus de précipitation diminuant fortement la perméabilité. L'étude des roches de couverture fracturées (argilite) a montré qu'une percolation alternée d'une saumure chargée en CO2 et de CO2 gaz augmentait la perméabilité de fracture. Dans le cas des roches silicatées, la précipitation de carbonates est mise en évidence aussi bien dans les grès à zéolites que dans les frittés de dunite de San Carlos. Cependant, dans les grès à zéolites, la précipitation d'une phase argileuse est observée dans les chemins d'écoulement et engendre une forte diminution de la perméabilité.
https://tel.archives-ouvertes.fr/tel-00416408

tel-00416408
https://tel.archives-ouvertes.fr/tel-00416408
https://tel.archives-ouvertes.fr/tel-00416408/document
https://tel.archives-ouvertes.fr/tel-00416408/file/These_Luquot.pdf

Éditeur(s) : HAL CCSD
Résumé : The Manche-à-Eau lagoon, brackish water ecosystem is subject to tide, trade winds and hurricanes. The 2004 map (IGN) is covered of a 90 m aside square, to place 37 spots in a GIS and to limit them on the field with a GPS. From aerial photos, the outlines drawing allows morphological follow up since 1950. Depth is measured at 1437 spots with bathymetric perch and prob. Stream direction is established during stream and ebb tide using ribbon fixed to the spot and a compass. Water volumes at low and high tide allow calculating the water renewal rate, at each tide. The mapping follow-up shows outlines and island stabilization because of the “shield effect” and soil (root peat), small islands aggregation/disaggregation depending of hurricanes passing. The present bathymetry shows the lagoon filling and the channels digging. General streams are subject to trade-winds (SSE-NNW) andthe tide movement to and fro. The up and down water generates a stream channel situated along the outlines and around dips and sandbanks. Water renewal volume (14.8 %) at each tide, combined with an active and various hydrodynamism tends to improve the water quality in this system.
Evolución Morfológica de la Laguna del Manglar Manche-à-EAU (Guadalupe, Antilles Francesas) de 1950 a 2004, y su batimetría eb 2007La laguna del Manche-à-Eau, ecosistema de agua salobre está sometido a la marea, a los alisios y a los huracanes. El mapa IGN de 2004 está dividido según una malla de 90 m para colocar 37 puntos en un SIG y limitarlos in situ con un GPS. Según las fotografías aéreas, el dibujo de los contornos hace posible el seguimiento morfológico desde 1950. La profundidad se mide en 1437 puntos con una pértiga y una sonda batimétrica. La orientación de las corrientes se establece en el mar y en el reflujo con catavientos fijados en los puntos, y una brújula. Las masas de agua entrantes y salientes permiten el cálculo del volumen de agua renovado durante cada marea. El seguimiento cartográfico muestra una estabilización de los contornos y de la isla debido al “efecto de escudo” y al suelo (turba de raíz), y una agregación/desagregación de los islotes según el paso de los huracanes. De acuerdo a la batimetría actual, se constatan el relleno de la laguna y la excavación de los canales. Las corrientes generales son controladas en superficie por los alisios, vientos de SSE-NNO y por el vaivén de la marea. Los movimientos ascendentes y descendentes de agua generan corrientes profundas a lo largo de los bordes y alrededor de depresiones y bajos. El volumen de agua renovado durante cada marea (14,8%) combinado al hidrodinamismo activo y variado tiende a vivificar este ecosistema.
La lagune de la Manche-à-Eau, écosystème d’eau saumâtre est soumis à la marée, aux alizés et aux ouragans. La carte IGN de 2004 est quadrillée selon une maille de 90 m pour placer 37 points dans un SIG et les borner sur le terrain avec un GPS. D’après les photographies aériennes, le dessin des contours rend possible le suivi morphologique depuis 1950. La profondeur est mesurée à 1437 points avec une perche et une sonde bathymétrique. L’orientation des courants est établie au flot et au jusant avec des penons fixés aux points, et une boussole. Les masses d’eau entrantes et sortantes permettent le calcul du volume d’eau renouvelé à chaque marée. Le suivi cartographique montre, une stabilisation des contours et de l’île due à « l’effet bouclier » et au sol (tourbe racinaire), et une agrégation/désagrégation des îlots selon le passage des ouragans. D’après la bathymétrie actuelle, le comblement de la lagune et le creusement des chenaux sont constatés. Les courants généraux sont gouvernés en surface par les alizés, vent de SSE-NNO et par le va-et-vient de la marée. Les descentes et remontées d’eau obligent ceux-ci à emprunter en profondeur les passages situés le long des berges et autour des dépressions et des hauts-fonds. Le volume d’eau renouvelé à chaque marée (14,8 %) combiné à l’hydrodynamisme actif et varié tend à vivifier cet écosystème.
Proceedings of the 61st Gulf and Caribbean fisheries institute
Le Gosier, Guadeloupe, France

hal-01600092
https://hal.archives-ouvertes.fr/hal-01600092
PRODINRA : 384819

Éditeur(s) : Universite Montpellier II
Résumé : Since 1980, the expansion of a green macro-alga: Valonia aegagropila (C Agardh) is observed in Salses-Leucate lagoon (France). It is currently distributed in the north of the lagoon with important biomasses (40 gDW/m²) eroding the cover of Zostera noltii. The free form of the alga can be transported with the surface or bottom currents depending on seasons. It multiplies mainly by vegetative reproduction. There are few studies on the ecophysiological capacities of V. aegagropila. This work tries to answer why (physiological adaptation) and how (mechanical process of transport) the alga invaded the lagoon, with an approach including observations, experiments in controlled environment and biological and hydrodynamic models. The growth capacities depend on temperature and light intensities, the nutrients absorption rates and internal nitrogen and phosphorus internal quotas were measured and modelled using a Droop model based on internal quota. Vertically transport was studied with laboratory experiments and measurements of biomass transport were made into the lagoon. The biological model (growth, vertical transport, mortality) was coupled to the MARS 3D hydrodynamic model with a meshgrid of 160m. The results show an adaptation of the alga to low availability of phosphorus and an annual growth of biomass controlled by the availability of nutrient during winter. The alga seems to occupy the whole zones where growth is optimal and the risk of invasion of the southern part of the lagoon is limited. This work opens on research prospects on an ecological model (confronting physiological capacities and competition of V. aegagropila, Zostera noltii, green algae and primary production), new physiological experiments, ecological observations and potential valorisation of V. aegagropila.
Depuis 1980, est observée dans l'étang de Salses-Leucate l'expansion d'une macro-algue verte : Valonia aegagropila (C. Agardh). En 2004, elle était présente sur la presque totalité de la moitié nord de la lagune avec des biomasses importantes (jusqu'à 600 gPS/m²). L'algue envahit et érode également la couverture d'herbiers garant de la biodiversité, de la productivité et de la stabilité de l'écosystème. V. aegagropila se reproduit essentiellement de manière végétative (fragmentation des thalles) et possède la particularité de retenir de l'oxygène de la photosynthèse dans sa structure sphérique. Cet oxygène piégé lui donne la possibilité de mouvement sur la verticale et d'être transportée dans le domaine par les courants. Les conditions physico-chimiques de l'étang présentent de fortes variations saisonnières en salinité, en température et en turbidité, ainsi que des apports nutritifs faibles : la production primaire est principalement limitée par le phosphore. Il existe malheureusement peu d'informations sur V. aegagropila ainsi que trop peu de connaissances sur son écophysiologie. Elle semble vivre dans des milieux plutôt oligotrophe dans des régions tropicales à sub-tropicales. Ce travail basé sur une approche d'observations de terrain, d'expérimentations en milieu contrôlé (en laboratoire) et de modélisation des processus, a permis d'une part d'explorer les capacités adaptatives physiologiques de V. aegagropila aux conditions environnementales de l'étang et d'autre part de mettre à jour les modes de fonctionnement de la dynamique spatio-temporelle de la population. Les capacités de croissance ont été mesurées sur un large spectre de température et de lumière. Les capacités d'absorption des sels nutritifs dans l'eau et les facultés de l'algue à stocker l'azote et le phosphore dans ses tissus ont également été étudiées. D'autre part, un modèle de dynamique des populations a été conceptualisé puis développé. Les processus pris en compte dans ce modèle sont la croissance de l'algue (modèle à quota interne), la flottabilité de l'algue et la mortalité par surdensité. Ces processus ont été paramétrés en majeure partie par des expérimentations réalisées en laboratoire. Ce modèle 0D a par la suite était couplé au modèle hydrodynamique MARS3D (modèle Ifremer) mis en place sur la lagune de Salses-Leucate, utilisant deux grilles de calcul (160m ou de 80m de résolution). Les simulations réalisées permettent d'appréhender les capacités spatio-temporelles de la croissance de l'algue dans l'étang, le turnover annuel de la biomasse totale et les attracteurs de biomasse du système sous différents évènements météorologiques. Ces résultats sont comparés avec les répartitions cartographiques de la population observées in situ en 1999 et 2004 et des flux de biomasses mesurés au cours d'observations de terrain entre juin 2003 et septembre 2004. L'ensemble des résultats montre d'une part une adaptation de l'algue à évoluer dans un milieu pauvre en phosphore et d'autre part une croissance annuelle de la biomasse totale qui est principalement contrôlée par les apports hivernaux en sels nutritifs dans la lagune. Les résultats des simulations montrent également que V. aegagropila semble occuper à présent la majeure partie des zones favorables à sa croissance. Il est également montré que si sa capacité de mouvement peut favoriser la dispersion d'individus dans la lagune et accélérer la croissance de la population pour de faibles biomasses initiales, cette même capacité de mouvement joue plutôt un rôle de régulation de la population lorsque la biomasse totale devient importante. On peut penser que le risque de colonisation de l'herbier à zostère de la partie sud de la lagune (bassin de Salses) est limité. Ce travail ouvre enfin des perspectives de recherche sur l'amélioration du modèle de dynamique des populations de l'espèce, sur de nouvelles expérimentations à réaliser ou encore sur la surveillance écologique du milieu. Des propositions sont faites pour concevoir un modèle écologique confrontant les capacités physiologiques des macrophytes (algues vertes, Valonia et zostères) afin d'apréhender les phénomènes de compétitions et les modes de fonctionnement du réseau trophique de la lagune de Salses- Leucate. Des pistes sur la valorisation de la matière algale de V. aegagropila sont enfin proposées.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2006/these-2453.pdf
http://archimer.ifremer.fr/doc/00000/2453/

Éditeur(s) : HAL CCSD American Society for Microbiology
Résumé : International audience
The bivalve Codakia orbicularis, hosting sulfur-oxidizing gill endosymbionts, was starved (in artificial seawater filtered through a 0.22- m-pore-size membrane) for a long-term experiment (4 months). The effects of starvation were observed using transmission electron microscopy, fluorescence in situ hybridization and catalyzed reporter deposition (CARD-FISH), and flow cytometry to monitor the anatomical and physiological modifications in the gill organization of the host and in the symbiotic population housed in bacteriocytes. The abundance of the symbiotic population decreased through starvation, with a loss of one-third of the bacterial population each month, as shown by CARD-FISH. At the same time, flow cytometry revealed significant changes in the physiology of symbiotic cells, with a decrease in cell size and modifications to the nucleic acid content, while most of the symbionts maintained a high respiratory activity (measured using the 5-cyano-2,3-ditolyl tetrazolium chloride method). Progressively, the number of symbiont subpopulations was reduced, and the subsequent multigenomic state, characteristic of this symbiont in freshly collected clams, turned into one and five equivalent genome copies for the two remaining subpopulations after 3 months. Concomitant structural modifications appeared in the gill organization. Lysosymes became visible in the bacteriocytes, while large symbionts disappeared, and bacteriocytes were gradually replaced by granule cells throughout the entire lateral zone. Those data suggested that host survival under these starvation conditions was linked to symbiont digestion as the main nutritional source.
ISSN: 0099-2240

hal-00750419
https://hal.univ-antilles.fr/hal-00750419
DOI : 10.1128/AEM.02659-08

Éditeur(s) : Université des Antilles Études caribéennes
Résumé : Sur la terre ferme, la sécurité est devenue un thème récurrent de la vie politique, des imaginaires voire de la réalité. Dans le monde de la croisière au contraire, la communication vend un univers idyllique. Or la réalité de la vie à bord du navire n’est pas faite que de bonheur, et les armateurs, les voyagistes, les équipages et les autorités administratives anticipent des situations qui mettent en péril les passagers. La gestion des épidémies ne se limite pas à la grippe H1N1, moment exceptionnel qui cache la réalité fréquente des épidémies de gastro-entérite. Le quotidien sécuritaire est aussi constitué par les risques plus traditionnels : le feu et le naufrage. La croisière également s’accompagne de viols et violences sur des croisiéristes, voire de disparitions de passagers. Ces trois dangers de la croisière font l’objet de mesures de santé publique, de définition de normes de sécurité internationales depuis 1914, et de mesures législatives récentes, puisque le dernier texte a été promulgué par le président Obama en juillet 2010. L’Europe montre un retard important dans l’organisation de cette politique, gage de développement de l’industrie de la croisière.
On land, security has become a recurring theme in the political life of the imagination or reality. In the world of cruising the contrary, communication sells idyllic world. The reality of life on the ship is not made that happiness, and shipowners, operators, crews and administrative authorities anticipate situations that endanger passengers. Outbreak management is not limited to the H1N1 exceptional moment that hides the reality of frequent outbreaks of gastroenteritis. The daily safe is also constituted by the more traditional risks: fire and sinking. The cruise also accompanied by rape and violence on cruise or disappearances of passengers. These three dangers of the cruise are the subject of public health measures, definition of international safety standards since 1914, and recent legislation, since the final text was issued by President Obama in July 2010. Europe shows a significant delay in the organization of the political guarantee for the development of the cruise industry.

Droits : info:eu-repo/semantics/openAccess
urn:doi:10.4000/etudescaribeennes.5220
http://journals.openedition.org/etudescaribeennes/5220

Éditeur(s) : HAL CCSD Elsevier
Résumé : International audience
To test the impact of fluid flow on the reactivity of porous (ultra-)mafic rocks, reactive percolation experiments were realized during which CO2-enriched water was injected at two different injection rates (Q = 0.1 and 1 mL h−1) through sintered analogues of olivine-accumulation zones in basaltic flows at temperature and fluid composition conditions (T = 180 °C; NaHCO3 buffered solution) favorable for CO2-mineralization (carbonation).All experiments resulted in silicate dissolution, carbonate precipitation upstream and (proto-)serpentine formation downstream indicating a decrease in the fluid reactivity along flow paths. The measured bulk carbonation rates ranged from 4 to 7 × 10−8 s−1; these values were significantly lower than previously published values of olivine carbonation rate obtained on powders in closed batch and flow-through reactors. Our study show complex couplings, at pore scale, between fluid flow, localization of reaction zones, and chemical reaction kinetics which in turn control hydrodynamic properties, carbonation rate and efficiency and fluid reactivity. This results in carbonation rates being higher when injection rates are high and permeability ultimately controlling carbonation reactions by limiting fluid input. During experiments, notable changes in permeability occurred for only minor changes in porosity indicating a control by the geometry of the porous network: heterogeneities in the distribution of flow paths favored the localization of precipitated minerals which in turn resulted in the closure of flow paths. This mechanism was particularly efficient at low injection rates. These results imply that controlling the injection rate could allow enhancing/limiting the efficiency of in situ carbonation.
ISSN: 0883-2927

hal-01115284
https://hal.archives-ouvertes.fr/hal-01115284
DOI : 10.1016/j.apgeochem.2014.11.024

Éditeur(s) : ICES 2008 Annual Science Conference, 22-26 september 2008, HALIFAX, CANADA
Résumé : Since 2000, Ifremer has been implemented a Fisheries Information System (FIS), in strong collaboration with the DPMA (Direction of fisheries and aquaculture of the French Ministry of Agriculture and Fisheries). The FIS aims at building an operational and multidisciplinary monitoring network for scientific purposes, allowing a comprehensive view of fishery systems including their biological, technical, environmental and economical components. The objectives of the FIS are (i) to provide the specifications and methodologies for the collection, storage and processing of fisheries data, with the constant concern to harmonise all these procedures on a national scale, (ii) to improve data management system and access to data for a wide-spread public, and (iii) to produce and distribute relevant datasets, indicators and synthesis, for understanding and evaluation, including bio-economic diagnostics of the fisheries, and assessment of the short and long-term impacts of fisheries management scenario and measures. The FIS covers all the French fisheries, including overseas territories and small-scale fisheries, for which data are often hardly available or missing, whereas two thirds of the French vessels are less than 12 meters long. The challenge was to establish a statistical and an integrated approach supporting bio-ecological and economic issues. To further an integrated analysis of the fishery systems, the wide range kinds of data - including acoustic surveys, biological in-situ observations, environmental observations, as well as fishing statistics (landings and efforts) or economic data - are managed in a single data management system, based on an integrated relational data base with geographical facilities.

Droits : 2008 ICES
http://archimer.ifremer.fr/doc/00059/17002/14504.pdf
http://archimer.ifremer.fr/doc/00059/17002/

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : On the basis of an existing multiparameter borehole fluid sensor(p, T Cw, pH, Eh), a new downhole tool designed for 200 bars and 75 degrees C was developed to measure the spontaneous electrical potential in situ with great precision (better than a mu V). To this end, the new sensor is based on the use of unpolarizable Pb/PbCl2 electrodes either at the surface or downhole. In situ testing has demonstrated a capacity to identify several subsurface sources of natural electrical potential such as diffusion ones (membrane potential in the presence of clays, Fickian processes due to pore fluid salinity gradients), or else the electrokinetic mechanisms with gradients in pore fluid pressure. As a consequence, Multi-Sensors Electrical Tool (MuSET) might be used as an "electrical flow meter" sensitive to both horizontal and vertical fluid flow in a vertical borehole.
ISSN: 1631-0713

hal-00445251
https://hal.archives-ouvertes.fr/hal-00445251
DOI : 10.1016/j.crte.2009.07.009

Éditeur(s) : HAL CCSD Elsevier Masson
Résumé : While oceanic circulation in the Gulf of Lion (GoL) has often been studied in calm weather or with northerly winds (Tramontane or Mistral) through observations and numerical circulation models, few studies have focused on southeasterly storm events. Yet, correct representation of the circulation during storms is crucial if the suspension of sediments is to be correctly modelled throughout the Gulf. The purpose of this paper is to describe the hydrodynamics in the Gulf of Aigues-Mortes (NW of the GoL) during the storm of 18 February 2007 by using a set of data from an ADCP station placed at a depth of 65 m on the sea bed off the coast at Sète, supplemented by the ocean circulation model SYMPHONIE. This storm was characterized by a moderate south-easterly wind (15 m . s−1) and waves of up to 5 m of significant height at its apex. At the ADCP, strong currents of up to 0.8 m . s−1 near the surface and 0.5 m . s−1 near the bottom were recorded, parallel to the coast, flowing towards the south-west. The simulated currents were widely underestimated, even taking the effect of waves into account in the model. It was suspected that the representation of the wind in the atmospheric model was an underestimation. A new simulation was therefore run with an arbitrarily chosen stronger wind and its results were in much better agreement with the measurements. A simplified theoretical analysis successfully isolated the wind-induced processes, responsible for the strong currents measured during the apex and the strong vertical shear that occurred at the beginning of the storm. These processes were: 1/ the barotropic geostrophic current induced by a wind parallel to the coast and 2/ the Ekman spiral. The duration of the storm (about 36 h at the apex) explains the continuous increase of the current as predicted by the theory. The frictionally induced Ekman transport explains the current shear in the surface layer in the rising stage of the storm, and the addition of high waves and strong wind at the apex is more in favour of strong vertical mixing in the surface layer.
ISSN: 1631-0713

hal-00908200
https://hal.archives-ouvertes.fr/hal-00908200
DOI : 10.1016/j.crte.2013.07.001

Éditeur(s) : Copernicus Gesellschaft Mbh
Résumé : The sea surface salinity (SSS) measured from space by the Soil Moisture and Ocean Salinity (SMOS) mission has recently been revisited by the European Space Agency first campaign reprocessing. We show that, with respect to the previous version, biases close to land and ice greatly decrease. The accuracy of SMOS SSS averaged over 10 days, 100 x 100 km(2) in the open ocean and estimated by comparison to ARGO (Array for Real-Time Geostrophic Oceanography) SSS is on the order of 0.3-0.4 in tropical and subtropical regions and 0.5 in a cold region. The averaged negative SSS bias (-0.1) observed in the tropical Pacific Ocean between 5 degrees N and 15 degrees N, relatively to other regions, is suppressed when SMOS observations concomitant with rain events, as detected from SSM/Is (Special Sensor Microwave Imager) rain rates, are removed from the SMOS-ARGO comparisons. The SMOS freshening is linearly correlated to SSM/Is rain rate with a slope estimated to -0.14 mm(-1) h, after correction for rain atmospheric contribution. This tendency is the signature of the temporal SSS variability between the time of SMOS and ARGO measurements linked to rain variability and of the vertical salinity stratification between the first centimeter of the sea surface layer sampled by SMOS and the 5 m depth sampled by ARGO. However, given that the whole set of collocations includes situations with ARGO measurements concomitant with rain events collocated with SMOS measurements under no rain, the mean -0.1 bias and the negative skewness of the statistical distribution of SMOS minus ARGO SSS difference are very likely the mean signature of the vertical salinity stratification. In the future, the analysis of ongoing in situ salinity measurements in the top 50 cm of the sea surface and of Aquarius satellite SSS are expected to provide complementary information about the sea surface salinity stratification.
Ocean Science (1812-0784) (Copernicus Gesellschaft Mbh), 2013 , Vol. 9 , N. 1 , P. 183-192

Droits : Author(s) 2013. CC Attribution 3.0 License.
http://archimer.ifremer.fr/doc/00139/25073/23161.pdf
DOI:10.5194/os-9-183-2013
http://archimer.ifremer.fr/doc/00139/25073/

Éditeur(s) : Pergamon-elsevier Science Ltd
Résumé : The south-west lagoon of New Caledonia is a wide semi-open coral reef lagoon bounded by an intertidal barrier reef and bisected by numerous deep inlets. This paper synthesizes findings from the 2000-2008 French National Program EC2CO-PNEC relative to the circulation and the transport of suspended particles in this lagoon. Numerical model development (hydrodynamic, fine suspended sediment transport, wind-wave, small-scale atmospheric circulation) allowed the determination of circulation patterns in the lagoon and the charting of residence time, the later of which has been recently used in a series of ecological studies. Topical studies based on field measurements permitted the parameterisation of wave set-up induced by the swell breaking on the reef barrier and the validation of a wind-wave model in a fetch-limited environment. The analysis of spatial and temporal variability of suspended matter concentration over short and long time-scales, the measurement of grain size distribution and the density of suspended matter (1.27 kg 1(-1)), and the estimation of erodibility of heterogeneous (sand/mud, terrigenous/biogenic) soft bottoms was also conducted. Aggregates were shown to be more abundant near or around reefs and a possible biological influence on this aggregation is discussed. Optical measurements enabled the quantification of suspended matter either in situ (monochromatic measurements) or remotely (surface spectral measurements and satellite observations) and provided indirect calibration and validation of a suspended sediment transport model. The processes that warrant further investigation in order to improve our knowledge of circulation and suspended sediment transport in the New Caledonia lagoon as well as in other coral reef areas are discussed, as are the relevance and reliability of the numerical models for this endeavour.
Marine Pollution Bulletin (0025-326X) (Pergamon-elsevier Science Ltd), 2010 , Vol. 61 , N. 7-12 , P. 269-296

Droits : 2010 Elsevier Ltd All rights reserved.
http://archimer.ifremer.fr/doc/00014/12526/9401.pdf
DOI:10.1016/j.marpolbul.2010.06.023
http://archimer.ifremer.fr/doc/00014/12526/

Éditeur(s) : HAL CCSD
Résumé : Juin 2003
Dans le contexte actuel de mondialisation, de changement climatique et de forte anthropisation de la biosphère, les Petites Antilles s'érigent en monde marginal ou encore en anti-monde. Fracturées du point de vue politique, économique, linguistique et à certains égards culturel, ces territoires insulaires du Bassin caraïbe recèlent de richesses environnementales (physiques, écosystèmiques et paysagères). Comme partout ailleurs dans le monde humanisé, la survie de ces sociétés implique le rétablissement des grands équilibres écologiques consubstantiels à une articulation efficiente entre le naturel, l'urbain et l'agricole. Compte tenu de la pression démographique, variable d'une île à l'autre, la pérennité des écosystèmes en covariance avec un développement économique profitant au plus grand nombre ne peut se concevoir à l'échelle insulaire. Il semble judicieux d'imaginer un développement à l'échelle de l'archipel basé sur la complémentarité, puisque au sein de chaque composante les diverses ressources biologiques terrestres et marines sont insuffisantes pour assurer une autosuffisance en termes de produits de premières nécessités et d'énergie. Le développement des Petites Antilles s'il doit être durable et prendre comme ossature les directives de Rio (Brésil, 1992) et de Johannesburg (Afrique du Sud, 2002), il devra s'inscrire dans une gestion administrative, scientifique, technique et agricole commune dans le cadre d'une Caraïbe fonctionnellement unifiée. A l'unité floristique, faunistique et biocénotique doivent correspondre des stratégies et donc des politiques, similaires mais diversifiées, d'utilisation des ressources abiotiques (énergie éolienne, hydroélectrique et photovoltaïque) et biotiques (écosystèmes terrestres et marins, flore, faune, sols). Malheureusement dans le présent, la compartimentation économique et politique de la Caraïbe rend ces propos profondément utopiques. Néanmoins dans le futur la survie des peuples des Petites Antilles, impliquera un développement durable signifié par des rapports équilibrés entre hommes et milieux.
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In the nowadays context of "globalization", climatic variation and great anthropization of the biosphere, the Lesser Antilles appear as a marginal world. In a political point of view, those islands offer a greatly distinct and fractured image. The same fact can also be observed in an economic, linguistic and, in a certain measure, cultural perspective. Despite of such a statement, those territories of the Caribbean basin keep economic and landscape resources whom survival depends on the re-establishment of the great ecologic structures implying a productive articulation between the natural, the urban and the agricultural. It seems pertinent to imagine a development on the level of the archipelago based upon complementarity since each constituent presents a limited number of earth and marine biologic reserves which do not guarantee an autosubsistance in energy and first nessecity productivity. A lasting development of the Lesser Antilles supposes a necessary and commun administrative, scientific, technical and agricultural management within the setting of a Caribbean functionally unified. Facing the biocenotic unity, a useful strategy, based on a similar and diversified organization in the exploitation of biophisic resources, must be erected. Such statements could be considered as utopic, regarding the situation of politic and economic division in the Caribbean nowadays. However, in the future, the survival of those insular societies will imply a lasting development lying upon an efficient relationship between Man and environment.
https://halshs.archives-ouvertes.fr/halshs-00003054

Droits : info:eu-repo/semantics/OpenAccess
halshs-00003054
https://halshs.archives-ouvertes.fr/halshs-00003054
https://halshs.archives-ouvertes.fr/halshs-00003054/document
https://halshs.archives-ouvertes.fr/halshs-00003054/file/Devpt-durable_JOSEPH-PHILIPPE.pdf

Éditeur(s) : HAL CCSD MDPI
Résumé : International audience
Hand disinfection with alcohols-based hand rubs (ABHRs) are known to be the most effective measure to prevent nosocomial infections in healthcare. ABHRs contain on average 70% by weight of one or more alcohols. During the hand rubbing procedure, users are exposed to these alcohols not only through dermal contact, but also via inhalation, due to the physical and chemical properties of alcohols volatilizing from alcoholic solutions or gels into the air. Ethanol ingestion is well known to increase risks of several diseases (affecting the pancreas, liver, cardiovascular system…), but there is a lack of knowledge about the effects of exposure to other alcohols (including n- or isopropanol) via inhalation and dermal contact, despite the worldwide use of ABHRs. This work aims at discussing possible health effects related to unintentional alcoholization (via inhalation and dermal contact) from professional ABHR usage to suggest the need for more research in this area (but not to question the value of ABHRs). Based upon an average of 30 hand rubbings per healthcare professional per day, it can be assumed that a healthcare worker may be exposed to a maximum 5,500 mg/m(3) per work shift, five times above the recommended occupational time weighted average limit. Thus, in order to answer the question posed in the title, studies on spatial and temporal variability of alcohol emission from ABHRs in real world situations and studies on certain high risk individuals are needed.
ISSN: 1660-4601

hal-01122305
https://hal.archives-ouvertes.fr/hal-01122305
PUBMED : 20948945
DOI : 10.3390/ijerph7083038
PUBMEDCENTRAL : PMC2954566