Éditeur(s) : Springer
Résumé : The Var turbidite system is a small sandy system located in the Ligurian Basin. It was deposited during the Pliocene-Quaternary in a flat-floored basin formed during the Messinian salinity crisis. The system was fed through time by the Var and Paillon canyons that connect directly to the Var and Paillon rivers. It is still active during the present sea-level highstand. Two main mechanisms are responsible for gravity-flow triggering in the Var turbidite system: (1) mass-wasting events affect mainly the upper part of the continental slope, in areas where volumes of fresh sediment delivered by rivers are highest, and result from the under-consolidation state of slope sediments and earthquakes, and (2) high-magnitude river floods resulting from melting of snow and convective rainfall during fall and spring seasons, and generating hyperpycnal turbidity currents at river mouths when the density of freshwater transporting suspended particles exceeds that of ambient seawater. Failure- and flood-induced gravity flows are involved through time in the construction of the Var Sedimentary Ridge, the prominent right-hand levee of the Var system, and sediment waves. Processes of construction of both the Var Ridge and sediment waves are closely connected. Sandy deposits are thick and abundant in the eastern (downchannel) part of the ridge. Their distribution is highly constrained by the strong difference of depositional processes across the sediment waves, potentially resulting through time in the individualization of large and interconnected sand bodies.
Geo-Marine Letters (0276-0460) (Springer), 2006-12 , Vol. 26 , N. 6 , P. 361-371

Droits : 2006 Springer
http://archimer.ifremer.fr/doc/2006/publication-2258.pdf
DOI:10.1007/s00367-006-0047-x
http://archimer.ifremer.fr/doc/00000/2258/

Éditeur(s) : Gauthier-Villars
Résumé : The temporal Variations in macroalgal coverage and biomass of two sectors of a fringing reef complex in Reunion Island, subject to different levels of nutrient enrichment, were compared over eight months. Little difference was detected in the back reef zone, but in the narrow coral strip zone the highly enriched site showed significantly higher coverage, biomass and diversity of macroalgae throughout the whole study period. Differences in the levels of nutrient enrichment of the reef waters of the two sites are implicated as potential reasons for the observed differences. The seasonal Variations of macroalgae on the reef, and aspects of several of the dominant algal species encountered are also discussed.
Oceanologica Acta (0399-1784) (Gauthier-Villars), 1997 , Vol. 20 , N. 6 , P. 851-861

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00093/20468/18140.pdf
http://archimer.ifremer.fr/doc/00093/20468/

Éditeur(s) : HAL CCSD BioScientifica
Résumé : International audience
BACKGROUND: Differences in circulating steroid hormone levels have been hypothesized to explain ethnic differences in steroid-related diseases. The aim of this study was to determine the serum levels of a wide panel of steroid hormones, both androgens and estrogens, in healthy middle-aged African-Caribbean and European men. DESIGN AND METHODS: Serum steroid hormone levels were determined in men participating in a systematic public health study funded by the French National Health Insurance system. Blood was collected in the morning from 304 healthy African-Caribbean and European men aged between 40 and 69 years. Serum steroids were measured by mass spectrometry-gas chromatography, except for DHEAS and sex hormone-binding globulin, which were determined by RIA. Data were analyzed in 10-year age intervals by analysis of covariance, with adjustment for age, body mass index, waist-to-hip ratio, tobacco and alcohol consumption, and season of sampling. RESULTS: Compared with Europeans, African-Caribbean men presented significantly higher serum levels of measured bioavailable testosterone, 4-androstenedione (4-dione), and estrone (E1) regardless of the age group, of 5-androstenediol (5-diol) in those aged 40-49 and 50-59 years, and of testosterone (TT) and dihydrotestosterone in those aged 40-49 years. In contrast, European men aged 40-69 years showed significantly higher serum levels of DHEA and DHEAS. CONCLUSIONS: Significant differences in serum steroid hormone levels were observed in middle-aged African-Caribbean and European men. Whether such differences could contribute to ethnic differences in disease risk in adult men remains to be investigated. Some steroids, such as bioavailable TT, 4-dione, 5-diol, and E1, deserve particular attention.
ISSN: 0804-4643

hal-00876034
https://hal.archives-ouvertes.fr/hal-00876034
DOI : 10.1530/EJE-11-0551
PUBMED : 21951700

Éditeur(s) : HAL CCSD
Résumé : International audience
After the 2009 Morakot typhoon, which triggered numerous large landslides in Taiwan, Mouyen et al. (2013)showed for the first time the potential of time-lapse gravity survey to infer the mass of sediments transferringby landsliding or through rivers. By providing an integrated measurement of masses, gravimetry might thus becomplementary to common methods used to assess the sediments discharge of rivers. But the masses of rocksdisplaced by Morakot were exceptionally large as a result of the record-breaking rainfalls brought by this typhoonand one might wonder to what extent time-lapse gravimetry could record such sediment transfers. In order tobetter assess the capabilities of this method, we set a time-lapse gravity network dedicated to the monitoring ofsuch sediments transfers in Paolai village (south-central Taiwan). Paolai is located near the large Laonong riverwhere temporary alluvial deposits of sediments exist and face steep mountain slopes likely to experience landslides.Both features are considered as potential source of mass transfers, and in turn of temporal gravity changes. Thefirst base gravity measurements were done in November 2015, using absolute and relative gravimeters, and will berepeated every year, before and after the typhoon season. In the same time, we also use a terrestrial lidar to scan thegeometry of both the river and the mountain slopes, hence providing a detailed topographical survey of the studiedarea. Adding Lidar measurements is an efficient strategy to solve for the non-uniqueness of gravity solutions.Meanwhile, we use the Eros morphodynamic model, that combine landsliding and flooding models, to investigatevarious scenarios of landsliding and subsequent sediment transport and compute the gravity changes on a virtualnetwork of gravimeters. This gives us insights on the expected order of magnitudes for these surface sedimenttransfers, which are useful to unravel the induced gravity signal from others sources such as local hydrology orvertical ground displacements. The modeling results also enable us to set network location that are best defined todetect mass changes associated with sediment transfer. The main objective of this study is to test whether timelapsegravity brings a new and reliable information compared to present methods monitoring sediments transfersand landscape evolution.
European Geosciences Union General Assembly 2016
Vienne, Austria

insu-01308554
https://hal-insu.archives-ouvertes.fr/insu-01308554

Éditeur(s) : HAL CCSD
Résumé : Satellite and in situ chlorophyll concentration data collected as part of VALidation HYperspectral of a BIOgeochemical model (ValHyBio), a PNTS-sponsored project dedicated to satellite ocean-colour imaging of the Southwest Pacific, are analyzed to describe chlorophyll variability in the Coral Sea, a vast oligotrophic region characterized by a deep chlorophyll maximum and blue waters of high transparency. Average chlorophyll concentrations estimated from MODIS-Aqua are very low (<0.2 mg m-3) except in the vicinity of main islands and coral reefs, where enrichment may occur due to upwelling or internal waves that bring nutrients to the euphotic zone from the deep part of the water column. During the summer season, blooms of cyanobacteria (Trichodesmium) develop in the surface waters and may form large slicks. The nitrogen fixed by these slicks is a potential source of new nitrogen later assimilated by picoplankton and the marine food chain. Coastal areas exhibit higher chlorophyll concentrations because of nutrient input from the land, as observed in 2008 around New Caledonia. In lagoon areas, the sea colour is influenced by turbidity and bathymetry, and the MODIS OC3 algorithm is inadequate, with a systematic overestimation of chlorophyll concentration in the New Caledonia lagoon. Improved bio-optical algorithms are needed for those turbid and shallow waters, to allow not only a better description of chlorophyll variability, but also evaluation of chlorophyll simulations by recently developed biogeochemical models.
of the 12th International Coral Reef Symposium, 18E
CAIRNS, Australia

hal-00746470
https://hal.archives-ouvertes.fr/hal-00746470
https://hal.archives-ouvertes.fr/hal-00746470/document

Résumé : Selective breeding of shrimp for viral resistance is established for species like L. vannamei and L. stylirostris. However, selection for bacterial infection resistance is not documented. In New Caledonia, "Syndrome 93" is a vibriosis that affects cultured shrimps during the cool season with survival from 15 to 30%. Current practises for breeders rearing at low densities do not improve the resistance of the offsprings mainly because selection pressures for "Syndrome 93" are low. Even after the fifth generation, survival improvement is not significant.
La sélection génétique de lignées de crevettes résistantes à certains virus a démontré son efficacité en particulier chez L. vannamei et L. stylirostris. En revanche, la sélection de crevettes résistantes à une bactérie du genre Vibrio est peu documentée. En Nouvelle-Calédonie, le « Syndrome 93 », vibriose à V. penaeicida, affecte toutes les fermes de crevettes L. stylirostris lors des élevages de saison fraîche. Les survies en bassins de grossissement, de l’ordre de 40 à 60% dans un élevage sain, tombent à des valeurs de 15 à 30%. L’élevage de géniteurs à faible densité, s’il maximise les performances de reproduction, ne semble pas optimiser la qualité de la descendance du fait des faibles pressions de sélection qui s’exercent vis-à-vis du syndrome 93. Les améliorations significatives du nombre d’animaux survivant aux infections et aux épisodes de mortalité en bassin restent faibles en valeur absolue à la 5ème génération de sélection expérimentale en conditions d’élevage, mais sur le long terme la stratégie testée pourrait se révéler économiquement efficace.

Droits : 2005 Ifremer
http://archimer.ifremer.fr/doc/00117/22848/20658.pdf
http://archimer.ifremer.fr/doc/00117/22848/

Éditeur(s) : Elsevier
Résumé : Emplacement of post-glacial turbidites is commonly controlled by rapid changes in sea level or by seismicity. On the continental rise of the Gulf of Lions (Western Mediterranean), an aseismic area, we identified turbiditic beds deposited during the rising stage and highstand of sea level. Swath bathymetry, sediment cores, in situ Cone Penetrating Tests (CPTU), heavy mineral associations and radiocarbon dating determined the source, composition, distribution and age of the turbiditic beds. Turbidites are composed of homogeneous to positively graded silts to medium sand with quartz (up to 90%), shell debris and shelfal benthic faunas. Their distribution on the sea floor is very patchy and controlled by abundant inherited erosional bedforms. Their source is found in relict regressive sands at the outershelf. Their deposition occurred just after the onset of the post-glacial sea level rise and the concomitant sediment starvation of the Rhone deep sea turbiditic system until recently. Whilst canyons are fed with sand by strong seasonal hydro-sedimentary dynamics on the outershelf, the emplacement of post-glacial turbidites is not controlled by sea level changes but probably by the periodic flushing of the canyons. Our study revealed that this low energy aseismic margin undergoes significant transport of sand, down to the base of slope, during the sea-level rise and the Holocene highstand.
Marine Geology (0025-3227) (Elsevier), 2009-02 , Vol. 257 , N. 1-4 , P. 65-86

Droits : 2009 Published by Elsevier Ltd.
http://archimer.ifremer.fr/doc/2009/publication-6316.pdf
DOI:10.1016/j.margeo.2008.10.013
http://archimer.ifremer.fr/doc/00000/6316/

Éditeur(s) : HAL CCSD Nature Publishing Group
Résumé : Nucleotide diversity was assessed within nine candidate genes (in total 4.6 kb) for the time of bud burst in nine sessile oak (Quercus petraea) populations distributed in central and northern Europe. The sampled populations were selected on the basis of their contrasting time of bud burst observed in common garden experiments (provenance tests). The candidate genes were selected according to their expression profiles during the transition from quiescent to developing buds and/or their functional role in model plants. The overall nucleotide diversity was large (pi(tot) - 6.15 x 10(-3); pi(silent) - 11.2 x 10(-3)), but population differentiation was not larger than for microsatellites. No outlier single-nucleotide polymorphism (SNP), departing from neutral expectation, was found among the total of 125 SNPs. These results contrasted markedly with the significant associations that were observed between the candidate genes and bud burst in segregating populations. Quantitative trait loci (QTLs) for bud burst were identified for 13 year*site seasonal observations in a cloned mapping pedigree. Nineteen QTLs were detected, and QTLs located on linkage groups 2, 5 and 9 contributed repeatedly to more than 12% of the phenotypic variation of the trait. Eight genes were polymorphic in the two parents of the pedigree and could be mapped on the existing genetic map. Five of them located within the confidence intervals of QTLs for bud burst. Interestingly, four of them located within the three QTLs exhibiting the largest contributions to bud burst.
ISSN: 0018-067X

hal-01032156
https://hal.archives-ouvertes.fr/hal-01032156
DOI : 10.1038/hdy.2009.170

Résumé : The principal objective of the work carried out in the deep waters adjoining the island shelf around Martinique between July 1991 and april 1992 was to establish an initial inventory of potentially exploitable deep benthic resources.The cylindrical lobster pot used during fishing experiments allowed the catch of a varied carcinological marine organisms of which six species at least have economic interest : 5 species of shrimp all belonging to the sub-order of Caridea of the Pandalidae family : Plesionika edwardsi, P. (macropoda) polyacanthomerus, P.laevis, Heterocarpus ensifer and H.laevigatus, and one species of prawn of the Nephropidae family : Eunephrops cadenasi. The yields, compared to those of commercial fishermen, were medium or good for Plesionika edwardsi and P. (macropoda) polyacanthomerus between depths of 200 - 300 metres ; for Plesionika laevis and Eunephrops cadenasi in the vicinity 500 metres ; for Heterocarpus laevigatus below 700 metres. The species Heterocarpus ensifer , of which the vertical distribution is very spread out from 170 to 600 metres, seems divided into two populations which provide good yields about 300 metres and below of 450 mètres. Data on the environment and the biology of the species where also established, especially on growth and breeding. For example growth of the pandalids is relatively rapid and their life cycle rather short, between three and four or five years according to the species. At least 2 principal egg-laying seasons occur in the annual cycle. Information is given on the isopoda of the family of Cirolanidae, Bathynomus giganteus, which could eventually, under certain conditions, become of interest to the fishermen.
Les pêches expérimentales effectuées dans les eaux profondes circum-martiniquaises,attenantes au plateau insulaire, entre juillet 1991 et avril 1992, avaient pour principal objectif d'établir un premier inventaire des ressources benthiques profondes potentiellement exploitables. Le casier cylindrique , a permis la capture d'une faune carcinologique variée dont 6 espèces au-moins ont présenté un intérêt économique : 5 espèces de crevettes appartenant toutes à l'infra-ordre des Caridea, famille des Pandalidae, Plesionika edwardsi, P. (macropoda) polyacanthomerus, P.laevis, Heterocarpus ensifer et H.laevigatus, et une espèce de langoustine, famille des Nephropidae: Eunephrops cadenasi. Les rendements, comparés à ceux des professionnels, sont moyens ou bons pour Plesionika edwardsi et P.(macropoda) polyacanthomerus entre 200 et 300 mètres de profondeur; pour Plesionika laevis et Eunephrops cadenasi autour de 500 mètres ; pour Heterocarpus laevigatus en-dessous de 700 mètres. L'espèce Heterocarpus ensifer dont la distribution verticale est très étendue, de 170 à 600 mètres, semble divisée en 2 populations pour lesquelles de bons rendements peuvent être obtenus vers 300 mètres et en-dessous de 450 mètres. Des données sur l'environnement et la biologie des espèces ont également été acquises, notamment sur la croissance et la reproduction. Ainsi la croissance des pandalides est relativement rapide et leur longévité plutôt courte, entre 3 et 4 ou 5 années selon les espèces. Au moins deux pontes principales interviennent sur un cycle annuel. Des informations sont données sur l'isopode de la famille des Cirolanidae, Bathynomus giganteus, qui pourrait éventuellement, sous certaines conditions, présenter un intérêt pour les pêcheurs.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/1994/rapport-1540.pdf
http://archimer.ifremer.fr/doc/00000/1540/

Éditeur(s) : HAL CCSD Station Biologique
Résumé : International audience
This study focuses on the diet of the eel Anguilla anguilla, sampled during one month of each of the four seasons from autumn 1998 to summer 1999 in the Languedocian Ingril Lagoon (Gulf ot Lion). The following feeding indices were calculated based on observations of 11 categories of prey found in the contents of full stomachs: coefficient of vacuity (CV), degree of fullness (DR), occurrence frequency (PP, in %), relative abundance (N, in %) and relative weight (P, in %). A parallel monitoring of the benthic macrofauna was conducted in autumn and spring. The interpretation of the results is based on the degree III of the scale of confinement established by Guélorget & Perthuisot (1983) and on the Costello et al. (1990) method, which combines PP and N. A. anguilla mainly feeds on benthic organisms, primarily amphipods crustaceans, polychaetes, insect larvae and small fish. The eel's feeding activity is very low in November and February and usually increases during May. The trophic quality available to the eel population in the Ingril Lagoon depends on its hydrodynamic variables, which are directly related to its close communication with the sea. Changes observed in the eel's diet over this year long study illustrate an opportunist type of feeding behaviour that reflects the typical composition of the macroinvertebrate species assemblage at a given point in time. Eels consume the type of benthic prey that is most available at a given moment without using a particular feeding strategy (e.g., specialisation or generalisation). The eels adapt by shifting their diet according to the energetic resources available in the ecosystem, which vary depending on hydrological regime. Thus, the facultative catadromous migrant species Anguilla anguilla could be used as a bioindicator of changes in the biological zonation and in the available food resources in the brackish ecosystem of Ingril Lagoon during its lagoon-resident ecophase.
ISSN: 0007-9723

hal-00753020
https://hal.univ-antilles.fr/hal-00753020

Éditeur(s) : Academic Press Inc Elsevier Science
Résumé : Several Vibrio species are known to be pathogenic to the Pacific oyster Crassostrea gigas. Survival varies according to pathogen exposure and high mortality events usually occur in summer during gametogenesis. In order to study the effects of gametogenetic status and ploidy (a factor known to affect reproduction allocation in oysters) on vibriosis survival, we conducted two successive experiments. Our results demonstrate that a common bath challenge with pathogenic Vibrio splendidus and Vibrio aestuarianus on a mixture of mature, spawning and non-mature oysters can lead to significant mortality. Previous bath challenges, which were done using only non-mature oysters, had not produced mortality. Immunohisto-chemical analyses showed the affinity of Vibrio for gonadic tissues, highlighting the importance of sexual maturity for vibriosis infection processes in oysters. Mortality rate results showed poor repeatability between tanks, however, in this bath challenge. We then tested a standardized and repeatable injection protocol using two different doses of the same combination of two Vibrio species on related diploid and triploid oysters at four different times over a year. Statistical analyses of mortality kinetics over a 6-day period after injection revealed that active gametogenesis periods correspond to higher susceptibility to vibriosis and that there is a significant interaction of this seasonal effect with ploidy. However, no significant advantage of triploidy was observed. Triploid oysters even showed lower survival than diploid counterparts in winter. Results are discussed in relation to differing energy allocation patterns between diploid and triploid Pacific oysters. (C) 2010 Elsevier Inc. All rights reserved.
Journal Of Invertebrate Pathology (0022-2011) (Academic Press Inc Elsevier Science), 2011-02 , Vol. 106 , N. 2 , P. 179-191

Droits : 2010 Elsevier Inc. All rights reserved.
http://archimer.ifremer.fr/doc/00030/14108/11368.pdf
DOI:10.1016/j.jip.2010.09.003
http://archimer.ifremer.fr/doc/00030/14108/

Éditeur(s) : Blackwell science
Résumé : This paper deals with the design of modelling tools suitable for investigating the consequences of alternative policies on the dynamics of resources and fisheries, such as the evaluation of marine protected areas (MPA). We first review the numerous models that have been developed for this purpose, and compare them from several standpoints: population modelling, exploitation modelling and management measure modelling. We then present a generic fisheries simulation model, Integration of Spatial Information for FISHeries simulation (ISIS-Fish). This spatially explicit model allows quantitative policy screening for fisheries with mixed-species harvests. It may be used to investigate the effects of combined management scenarios including a variety of policies: total allowable catch (TAC), licenses, gear restrictions, MPA, etc. Fisher's response to management may be accounted for by means of decision rules conditioned on population and exploitation parameters. An application to a simple example illustrates the relevance of this kind of tool for policy screening, particularly in the case of mixed fisheries. Finally, the reviewed models and ISIS-Fish are discussed and confronted in the light of the underlying assumptions and model objectives. In the light of this discussion, we identify desirable features for fisheries simulation models aimed at policy evaluation, and particularly MPA evaluation.
Fish and Fisheries (1467-2960) (Blackwell science), 2005-12 , Vol. 6 , N. 4 , P. 307-349

Droits : 2005 Blackwell Publishing, Inc
http://archimer.ifremer.fr/doc/2005/publication-1031.pdf
DOI:10.1111/j.1467-2979.2005.00199.x
http://archimer.ifremer.fr/doc/00000/1031/

Éditeur(s) : Amer Geophysical Union
Résumé : The temporal evolution and spatial distribution of surface salinity and colored detrital matter (cdm) were evaluated within and adjacent to the Amazon River Plume. Study objectives were as follows: first, to document the spatial coherence between Amazon discharge, salinity, cdm, and the nature of the salinity-cdm relationship; second, to document the temporal and spatial variability of cdm along the trajectory of the low-salinity Amazon Plume, and third, to explore the departure of cdm from conservative mixing behavior along the plume trajectory into the open ocean. Time series (2003-2007) of surface salinity estimated using the Advanced Microwave Scanning Radiometer-Earth Observing System and corresponding satellite cdm absorption (acdm) data documented a plume of freshened, colored water emanating from the Amazon. Salinity and acdm were generally coherent, but there were regions in which spatial patterns of salinity and acdm did not coincide. Salinity was oppositely phased with discharge, whereas acdm was in phase but lagged discharge and typically remained high after maximum discharge. Along the river plume trajectory, acdm was inversely correlated with salinity, yet there was considerable deviation from conservative mixing behavior during all seasons. Positive anomalies in a linear relationship between salinity and acdm corresponded to areas of enhanced satellite-retrieved net primary productivity, suggesting the importance of phytoplankton biomass or its subsequent remineralization as a source of cdm. Negative anomalies tended to predominate at the distal sections of the plume trajectories, an observation consistent with the process of photo-oxidation of cdm over observed time scales of days to weeks.
Journal Of Geophysical Research-oceans (0148-0227) (Amer Geophysical Union), 2011-07 , Vol. 116 , N. C00H02 , P. 14 p.

Droits : 2011 American Geophysical Union. All Rights Reserved.
http://archimer.ifremer.fr/doc/00041/15218/12593.pdf
DOI:10.1029/2011JC006989
http://archimer.ifremer.fr/doc/00041/15218/

Éditeur(s) : HAL CCSD Elsevier
Résumé : TAG LITHO
In this study we attempt to understand the water storage variations in a karst aquifer on the Larzac Plateau (South of France) using absolute gravimetry. On this karst system, water input is exclusively rainfall and draining occurs at the Durzon perennial spring in a karstic valley. Our basis assumption is that water storage in the vadose zone (epikarst and infiltration zone) has a significant effect on surface gravity through Newtonian attraction. The karst aquifer is hence being monitored since January 2006 with monthly absolute gravity measurements at three sites. The gravity measurements are corrected for regional scale gravity using water storage models in order to obtain gravity variations related exclusively to the local water storage variations. The gravity variations exhibit an important seasonal component (10-15 mu gal corresponding to a variation of equivalent water stab thickness of similar to 24-36 cm). Water storage variation seen by gravimetry is not spatially uniform on the studied karst system, corroborating current geomorphologic observations and interpretations. Finally, we use a global mass balance consideration linking rainfall, evapotranspiration and spring discharge to provide a conceptual framework for the understanding of observed gravity variations.
ISSN: 0022-1694

hal-00411884
https://hal.archives-ouvertes.fr/hal-00411884
DOI : 10.1016/j.jhydrol.2008.06.020

Éditeur(s) : Universite Montpellier II
Résumé : Since 1980, the expansion of a green macro-alga: Valonia aegagropila (C Agardh) is observed in Salses-Leucate lagoon (France). It is currently distributed in the north of the lagoon with important biomasses (40 gDW/m²) eroding the cover of Zostera noltii. The free form of the alga can be transported with the surface or bottom currents depending on seasons. It multiplies mainly by vegetative reproduction. There are few studies on the ecophysiological capacities of V. aegagropila. This work tries to answer why (physiological adaptation) and how (mechanical process of transport) the alga invaded the lagoon, with an approach including observations, experiments in controlled environment and biological and hydrodynamic models. The growth capacities depend on temperature and light intensities, the nutrients absorption rates and internal nitrogen and phosphorus internal quotas were measured and modelled using a Droop model based on internal quota. Vertically transport was studied with laboratory experiments and measurements of biomass transport were made into the lagoon. The biological model (growth, vertical transport, mortality) was coupled to the MARS 3D hydrodynamic model with a meshgrid of 160m. The results show an adaptation of the alga to low availability of phosphorus and an annual growth of biomass controlled by the availability of nutrient during winter. The alga seems to occupy the whole zones where growth is optimal and the risk of invasion of the southern part of the lagoon is limited. This work opens on research prospects on an ecological model (confronting physiological capacities and competition of V. aegagropila, Zostera noltii, green algae and primary production), new physiological experiments, ecological observations and potential valorisation of V. aegagropila.
Depuis 1980, est observée dans l'étang de Salses-Leucate l'expansion d'une macro-algue verte : Valonia aegagropila (C. Agardh). En 2004, elle était présente sur la presque totalité de la moitié nord de la lagune avec des biomasses importantes (jusqu'à 600 gPS/m²). L'algue envahit et érode également la couverture d'herbiers garant de la biodiversité, de la productivité et de la stabilité de l'écosystème. V. aegagropila se reproduit essentiellement de manière végétative (fragmentation des thalles) et possède la particularité de retenir de l'oxygène de la photosynthèse dans sa structure sphérique. Cet oxygène piégé lui donne la possibilité de mouvement sur la verticale et d'être transportée dans le domaine par les courants. Les conditions physico-chimiques de l'étang présentent de fortes variations saisonnières en salinité, en température et en turbidité, ainsi que des apports nutritifs faibles : la production primaire est principalement limitée par le phosphore. Il existe malheureusement peu d'informations sur V. aegagropila ainsi que trop peu de connaissances sur son écophysiologie. Elle semble vivre dans des milieux plutôt oligotrophe dans des régions tropicales à sub-tropicales. Ce travail basé sur une approche d'observations de terrain, d'expérimentations en milieu contrôlé (en laboratoire) et de modélisation des processus, a permis d'une part d'explorer les capacités adaptatives physiologiques de V. aegagropila aux conditions environnementales de l'étang et d'autre part de mettre à jour les modes de fonctionnement de la dynamique spatio-temporelle de la population. Les capacités de croissance ont été mesurées sur un large spectre de température et de lumière. Les capacités d'absorption des sels nutritifs dans l'eau et les facultés de l'algue à stocker l'azote et le phosphore dans ses tissus ont également été étudiées. D'autre part, un modèle de dynamique des populations a été conceptualisé puis développé. Les processus pris en compte dans ce modèle sont la croissance de l'algue (modèle à quota interne), la flottabilité de l'algue et la mortalité par surdensité. Ces processus ont été paramétrés en majeure partie par des expérimentations réalisées en laboratoire. Ce modèle 0D a par la suite était couplé au modèle hydrodynamique MARS3D (modèle Ifremer) mis en place sur la lagune de Salses-Leucate, utilisant deux grilles de calcul (160m ou de 80m de résolution). Les simulations réalisées permettent d'appréhender les capacités spatio-temporelles de la croissance de l'algue dans l'étang, le turnover annuel de la biomasse totale et les attracteurs de biomasse du système sous différents évènements météorologiques. Ces résultats sont comparés avec les répartitions cartographiques de la population observées in situ en 1999 et 2004 et des flux de biomasses mesurés au cours d'observations de terrain entre juin 2003 et septembre 2004. L'ensemble des résultats montre d'une part une adaptation de l'algue à évoluer dans un milieu pauvre en phosphore et d'autre part une croissance annuelle de la biomasse totale qui est principalement contrôlée par les apports hivernaux en sels nutritifs dans la lagune. Les résultats des simulations montrent également que V. aegagropila semble occuper à présent la majeure partie des zones favorables à sa croissance. Il est également montré que si sa capacité de mouvement peut favoriser la dispersion d'individus dans la lagune et accélérer la croissance de la population pour de faibles biomasses initiales, cette même capacité de mouvement joue plutôt un rôle de régulation de la population lorsque la biomasse totale devient importante. On peut penser que le risque de colonisation de l'herbier à zostère de la partie sud de la lagune (bassin de Salses) est limité. Ce travail ouvre enfin des perspectives de recherche sur l'amélioration du modèle de dynamique des populations de l'espèce, sur de nouvelles expérimentations à réaliser ou encore sur la surveillance écologique du milieu. Des propositions sont faites pour concevoir un modèle écologique confrontant les capacités physiologiques des macrophytes (algues vertes, Valonia et zostères) afin d'apréhender les phénomènes de compétitions et les modes de fonctionnement du réseau trophique de la lagune de Salses- Leucate. Des pistes sur la valorisation de la matière algale de V. aegagropila sont enfin proposées.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/2006/these-2453.pdf
http://archimer.ifremer.fr/doc/00000/2453/

Éditeur(s) : Taylor & Francis Ltd
Résumé : A new method is developed to estimate daily turbulent airsea fluxes over the global ocean on a 0.25 degrees grid. The required surface wind speed (w(10)) and specific air humidity (q(10)) at 10m height are both estimated from remotely sensed measurements. w(10) is obtained from the SeaWinds scatterometer on board the QuikSCAT satellite. A new empirical model relating brightness temperatures (T-b) from the Special Sensor Microwave Imager (SSM/I) and q(10) is developed. It is an extension of the author's previous q(10) model. In addition to T-b, the empirical model includes sea surface temperature (SST) and airsea temperature difference data. The calibration of the new empirical q(10) model utilizes q(10) from the latest version of the National Oceanography Centre airsea interaction gridded data set (NOCS2.0). Compared with mooring data, the new satellite q(10) exhibits better statistical results than previous estimates. For instance, the bias, the root mean square (RMS), and the correlation coefficient values estimated from comparisons between satellite and moorings in the northeast Atlantic and the Mediterranean Sea are 0.04gkg(1), 0.87gkg(1), and 0.95, respectively. The new satellite q(10) is used in combination with the newly reprocessed QuikSCAT V3, the latest version of SST analyses provided by the National Climatic Data Center (NCDC), and 10m air temperature estimated from the European Centre for Medium-Range Weather Forecasts (ECMWF) reanalyses (ERA-Interim), to determine three daily gridded turbulent quantities at 0.25 degrees spatial resolution: surface wind stress, latent heat flux (LHF), and sensible heat flux (SHF). Validation of the resulting fields is performed through a comprehensive comparison with daily, in situ values of LHF and SHF from buoys. In the northeast Atlantic basin, the satellite-derived daily LHF has bias, RMS, and correlation of 5Wm(2), 27Wm(2), and 0.89, respectively. For SHF, the statistical parameters are 2Wm(2), 10Wm(2), and 0.94, respectively. At global scale, the new satellite LHF and SHF are compared to NOCS2.0 daily estimates. Both daily fluxes exhibit similar spatial and seasonal variability. The main departures are found at latitudes south of 40 degrees S, where satellite latent and sensible heat fluxes are generally larger.
International Journal Of Remote Sensing (0143-1161) (Taylor & Francis Ltd), 2013-07 , Vol. 34 , N. 14 , P. 5243-5261

Droits : 2013 Taylor & Francis
http://archimer.ifremer.fr/doc/00137/24825/23575.pdf
DOI:10.1080/01431161.2013.787502
http://archimer.ifremer.fr/doc/00137/24825/

Résumé : Few years ago, proliferations of the green seaweed Enteromorpha have been noticed on sorne beaches of the southem coast of Martinique (American French Island). A study, in the year 1992, shows that Enteromorpha has a seasonal development, that nitrogen is the limiting factor, and that its principal feeding cornes from urban discharges thrown away directly into growing areas.
Certaines plages de la côte sud de Martinique voient apparaître depuis quelques années des échouages gênants de l'algue verte Enteromorpha. Une étude, réalisée en 1992, montre que le cycle de développement est saisonnier, que l'élément limitant est l'azote, et que la principale alimentation des proliférations d'algues vertes provient de rejets domestiques directs dans les zones de production.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00132/24277/22275.pdf
http://archimer.ifremer.fr/doc/00132/24277/

Éditeur(s) : EDP Sciences
Résumé : The present work was carried out on the hydroelectric reservoir Petit-Saut on the Sinnamary river in French Guiana. Measurements were performed during the wet and dry seasons along a longitudinal gradient, from upstream of the reservoir in two inflow rivers, to the Sinnamary estuary downstream of the dam. Gold extraction has led to a marked increase in suspended matter and total mercury (HgT) in one of the rivers. Dissolved monomethylmercury (MMHg) measured in surface waters were similar for both rivers: 0.03-0.05 ng l(-1) (1.0-1.7% of the dissolved HgT). These results indicate similar methylation efficiency and/or transfer of MMHg into the dissolved fraction of the water column, independently of the amounts of inorganic mercury transported. Dissolved MMHg concentrations in surface waters of the reservoir were similar to those in the rivers, but were more than 10 times higher in deep anoxic waters, up to 0.6 ng l(-1) (20 % of dissolved HgT). The MMHg concentration profiles in the water column suggest that methylation occurs mainly in anoxic waters and sediments in relation with the activity of sulfate reducing bacteria. Dissolved MMHg concentrations measured in the Sinnamary at the base of the dam were still high (0.5 - 0.6 ng l(-1); 20 to 35% of the dissolved HgT).
Journal de Physique IV (1155-4339) (EDP Sciences), 2003-05 , Vol. 107 , P. 327-331

Droits : EDP Sciences
http://archimer.ifremer.fr/doc/2003/publication-5283.pdf
DOI:10.1051/jp4:20030308
http://archimer.ifremer.fr/doc/00000/5283/

Éditeur(s) : The 11th Pacific Science Inter-Congress : Pacific Countries and their Ocean: Facing Local and Global Changes. March 2 - 6, 2009 Tahiti, French Polynesia
Résumé : New Caledonian shrimp farming feasibility studies started in the mid-seventies. Today ca. 2000 tons of Litopenaeus stylirostris, introduced in 1978, are semi-intensively produced each year. Since fifteen years, production has been impacted by two seasonal vibriosis, the “Summer” syndrome caused by Vibrio nigripulchritudo in relation to pond bottom and water column quality, and the “Winter Syndrome” caused by Vibrio penaeicida in relation to drastic temperature drops . With the ambition of elucidating processes possibly leading to mortality outbreaks in ponds, Ifremer has been conducting a research program since 2003 under the DESANS project (2003-2006) and the present DEDUCTION project, equally funded by the South and North Provinces and by the Government of New Caledonia. This program has been designed in a multidisciplinary approach integrating the suspected multifactorial origin of shrimp mortalities. Environment quality in ponds (either sediment or water column) plays a major role in the shrimp ecophysiological status, influencing sensitivity to pathogens . DEDUCTION focuses on a better knowledge of phytoplankton composition and biogeochemical fluxes at the sediment-water interface in ponds. Impact of farm discharges is also investigated. In addition, a more fundamental work is conducted to understand the pathogenicity mechanisms of these two Vibrio species but also to prevent the occurrence of viral infections through a RNA interference approach. Markers of the ecophysiological status of broodstock, larvae, post-larvae and reared animals, such as enzymes testifying from an oxidative stress, are developed. Gain of performance (resistance to pathogens and growth) were obtained on hybrids of the New Caledonian and introduced Hawaiian strains. Finally the database Stylog is exploited in view of discriminating “good” from “bad” rearings on the basis of relevant indicators.
Les études de faisabilité de l'aquaculture de crevettes ont débuté en Nouvelle-Calédonie dans les années soixante dix. Aujourd'hui environ 2000 tonnes de Litopenaeus stylirostris, introduite en 1978, sont produites chaque année de façon semi-intensive. Depuis quinze ans la production a été impactée par deux vibrioses : le syndrome d'été provoqué par Vibrio nigripulchritudo en relation avec la qualité de la tranche d'eau et des fonds de bassins et le syndrome d'hiver provoqué par Vibrio penaeicida en relation avec des chutes rapides de température. Dans le but d'élucider les processus entrainant des mortalités dans les élevages, Ifremer a conduit un programme de recherche depuis 2003 dans le cadre du projet DESANS (2003-2006) puis du présent projet DEDUCTION co-financé par les provinces Nord et Sud et le Gouvernement de la Nouvelle-Calédonie. Ce programme se construit dans une démarche multidisciplinaire intégrant les origines supposées multifactorielles des mortalités de crevettes. La qualité environnementale dans les bassins (les fonds et la colonne d'eau) joue un rôle majeur dans l'état physiologique des animaux, influençant leur sensibilité aux pathogènes. DEDUCTION se focalise sur une meilleure compréhension de la composition phytoplanctonique et des flux bio-géochimiques à l'interface eau/sédiment dans les bassins.L'impact des rejets des fermes est également étudié. En outre, un travail plus fondamental est conduit pour connaître les mécanismes de pathogénicité de ces deux espèces de Vibrio mais aussi pour prévenir les occurences d'infections virales par des approches ARN Interférence. Des marqueurs de l'état physiologique des oeufs, larves, post-larves et animaux en élevage, tels que les enzymes du stress oxydant sont utilisés.Les gains de performance (résistance aux pathogènes et croissance) sont obtenus sur des hybrides issus du croisement de la souche locale avec une souche hawaienne. Finalement la base de données STYLOG est exploitée dans le but de distinguer les bonnes des mauvaises pratiques sur la base d'indicateurs fiables.

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00143/25438/23591.pdf
http://archimer.ifremer.fr/doc/00143/25438/

Éditeur(s) : Gauthier-Villars
Résumé : The littoral area of Benin is a lagoonal-estuarial, indeed even deltaic, environment. Poor in species, the mangrove of Benin belongs to the tropical Atlantic type tending to be humid, considering the "drought belt" which affects this region. It undergoes profound hydrological changes in the course of the different seasons in relation to the Mono and Couffo Rivers. The granulometric analysis and the study of the facies makes clear a lenticular-type sedimentation in relation to numerous and rapid hydrodynamic variations. The clayish quartzose sediment also contains a chemical phase (pyrite is transformed through oxidation into jarosite, gypsum and halite in relation to the micromilieux of evaporation) and an important organic phase - with a pH level ranging from 5 to 6. Kaolinite, from the nearby "Continental terminal", is deposited during calm periods. The smectites seem linked to high energy, sandier deposits and their origin should probably be sought in a far away back country (Eocene, basement).
Oceanologica Acta, Special issue (0399-1784) (Gauthier-Villars), 1982

Droits : info:eu-repo/semantics/openAccess
http://archimer.ifremer.fr/doc/00246/35730/34238.pdf
http://archimer.ifremer.fr/doc/00246/35730/